Setaria italica (foxtail millet): 101781099
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Entry
101781099 CDS
T02818
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00900
Terpenoid backbone biosynthesis
sita01100
Metabolic pathways
sita01110
Biosynthesis of secondary metabolites
Module
sita_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101781099
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sita01006
]
101781099
Enzymes [BR:
sita01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
101781099
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
101781099
2.5.1.29 geranylgeranyl diphosphate synthase
101781099
Prenyltransferases [BR:
sita01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
101781099
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
101781099
NCBI-ProteinID:
XP_004967872
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Position
V:complement(5494167..5495741)
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AA seq
400 aa
AA seq
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MVASPTKSQLSVPPLSLLSSLHLGTSSEAETLHGYMDKLASCFVQHGAPSQSFKPYAPQR
STTQISPGRSRSVPVVRCAAAHAATVTAPKVTSVDVANVGSGSFDFERYLSATAKAVHDA
LDAALQGLRCPESLSESMRYSVLAGGKRLRPALAIAACELVGGPAAAATPVACAVEMIHT
SSLIHDDMPCMDNDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGCAAAGVPADR
ALRAVVELGSAAGVGGVAAGQVADMEGEGSAPVGLAALEYIHVHKTARLVEAAAASGAVV
GGGGDAEVEHVRRYAHFLGLLLQVVDDVLDVTGTSEQLGKTAGKDAAAGKATYPRLLGLE
GARAYAGELLAKAEAELDGFDAARAAPLRHLARFVAYRQH
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaagcccgaccaagtcccaactctcagtgcctccactctctctactctctagt
ctccacctcggcacctcctctgaggccgagacacttcacgggtacatggacaagttggca
tcctgcttcgtccagcatggagcaccatcccaaagcttcaagccctacgctcctcagaga
tccactacccagatctcgcctggacgcagccgatccgttccggtcgtccggtgcgccgcc
gcccatgctgctacagttacagcccccaaagtcaccagcgtcgacgtcgcaaatgttggc
agcggcagcttcgacttcgagcgctacctgtcggccaccgccaaggccgtgcacgacgcg
ctggacgccgccctgcagggcctgcggtgccccgagtccctgagcgagtcgatgcgctac
tccgtcctcgccggcggcaagcgcctccgccccgcgctggccatcgccgcctgcgagctc
gtcggcgggcccgccgccgccgcaacgccggtggcctgcgccgtcgagatgatccacacc
tcgtcgctcatccacgacgacatgccgtgcatggacaacgacgcgcttcgccgcggccgc
ccctccaaccacgtcgccttcggcgagcccacggcgctgctcgccggagacgcgctcctg
gcgctggcgttcgagcacgtggctcgcgggtgcgcggccgccggcgtccccgccgaccgc
gccctccgcgccgtcgtggagctcgggagcgcggcgggcgtgggcggcgtcgccgcgggg
caggtggccgacatggagggcgaggggtccgcgcccgtgggactcgccgcactggagtac
atccacgtgcacaagacggcgcggctcgtggaggccgcggcggcgtcgggcgccgtggtc
gggggcggcggggacgccgaggtggagcacgtccgccggtacgcgcactttttggggctc
ctgctccaggtggtggacgacgtgctggacgtgacgggcacgtcggagcagctcgggaag
acggcgggcaaggacgccgccgccggcaaggccacgtacccgcggctgttgggcctggag
ggggcgcgcgcgtacgctggggagctcctcgcgaaggccgaggccgagctcgacgggttc
gacgccgcgcgcgccgcgccgctgcggcacctcgcccggttcgtggcgtacaggcagcac
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