Setaria italica (foxtail millet): 101785546
Help
Entry
101785546 CDS
T02818
Name
(RefSeq) ABC transporter D family member 1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita02010
ABC transporters
sita04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101785546
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101785546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sita02000
]
101785546
Enzymes [BR:
sita01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
101785546
Transporters [BR:
sita02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
101785546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
Peptidase_M16
Peptidase_M16_C
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
nSTAND1
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
101785546
NCBI-ProteinID:
XP_012701758
LinkDB
All DBs
Position
V:46973949..46988606
Genome browser
AA seq
1738 aa
AA seq
DB search
MSSLQLLQLTERGRNLLSSRRRTLAVVSGALLAGGTLAYTQSGRWNKQQKENACSDGNAH
TGTKDRNGQNGIDGKLVKPRKKKSGLKSLHFLAAILLKKIGPNGSNYLLGLIITAVLRTA
VGHRLAKVQGYLFRAAFLRRVPTFTHLIIENLLLCFLQSTIYQTSKYLTGSLGLRFKKIL
TDLVHADYFENMVYYKISHVDHRISNPEQRIASDIPKFCSELSDLVQDDLAAIAEALIYI
WRLCSYASPKYVLWILAYVIGAGGTIRKFSPAFGKLKSMEQQLEGEYRQVHSRLRTHAES
VAFYGGENREASHIMQRFGALVKHLNVVLHENWWFGMIQDFLLKYLGATVGVILIIEPFF
AGNLRPESSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNILSGYANRIHELLEV
SRELSGVRDRLMTQNSSAANYISEANYIEFSGVKVVTPSGNVLVDDLTLRLESGSNLLIT
GPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSNLNKEIFYVPQRPYTAVGTLRDQLIYPL
TADQETEPLNYSGMVDLLKNVDLEYLLERYPLDKEVNWGDELSLGEQQRLGMARLFYHKP
KFAILDECTSAVTIDMEERFCKRVRAMGTSCITISHRPALVAFHEIVLSLDGEGGWNVQD
NRNGSSFSPEVEVDVLKSSETDRKSDALTVQRAFVTSTKGNASSKLKKQSYSTEVIASSP
SMEIEHTVQAPIVTQLKCSPRPLPVRVAAMSQILVPKLFDKQGGQLLAVAVLVFSRTWIS
DRIASLNGTSVKYVLEQDKAAFIRLTGISVLQSAANSIVSPSLRNLTSRIALGWRIRMTN
HLLQYYLKRNAFYKVFNISGMNMDADQRITHDVEKLTNDLAGLVTGMVKPLVDILWFTWR
MKLLSGRRGVAILYAYMFLGLGFLRAVSPDFGDLANQEQELEGTFRFMHSRLRTHAESIA
FFGGGSREKAMIDAKFTTWLNHSKVLLRKKWLYGIFDDFVTKQLPHNVTWGLSLLYALEH
KGDRALTSTQGELAHALRFLASVVSQSFIAFGDILELHKKFLELSGGINRIFELEELLQA
AQSNPAVPSDAIKAASEEIISFRNVDIVTPSQKLLASQLSCDVSQGKSLLVTGPNGSGKS
SIFRVLRGLWPIASGRLTKPSEGIFNVPQRPYTCLGTLRDQIIYPLSREEAELKMLSHET
SDKSAASKMLDDHLKMILENVRLVYLLEREGWDATPNWEDILSLGEQQRLGMARLFFHCP
KYGILDECTNATSVDVEEHLYRLATNMGITVITSSQVTPRSLYLSSSYLRYVWGLMDAEA
FWASSLRQGPSACIGFFVNSGSVYESGETTGVSYMLEKMAFKGTNHRRHRNLVHELELAG
GNVGASYSREQMVYSYDTLKGYMPEAIEILIDCMRNPLFLQEEVERQLVLAREEVQDLHK
NPEKFLHEQLNLVGFSGALANPLIPPEDALSRINDKIIQKFYHENYTADRVVLAASGVDH
EQLLNYAEFLLRDWHKGSPVEKPKSTYVGGDSRYRADSDMTHVALAFEVPGGWLQERDAT
IMTIIQTLMGGGGSFSSGGPGKGMHSRLYLRVLNKYHAVQSFSAFSNVYDNTGLFGIYLT
TSSDFVAKAVDVAISELIAVATPGEVTEVELQRAKNSTISSVLMNLESRVIVAEDIGRQL
LTYGCRKPIDYFLQCMEEITLDDITTFARKMLSSQPTTVSWGDVDKVPPYEFVCKRFR
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcttcagttactgcagctaacagaacgcgggcgcaaccttttgtcttcaaga
aggagaacacttgcagttgtttctggtgcactacttgctggcggaactttagcatatacc
cagtcaggccgatggaataaacaacagaaagaaaatgcttgcagcgatggaaatgcacat
accgggactaaagacagaaatggtcaaaatggtattgatggtaaattggttaaaccaagg
aaaaagaaaagtggattgaagtccttacattttctggccgccatcttacttaagaagatt
ggtccgaatggatcaaattaccttcttggcttgataataacagcagtcttgcgtacagct
gttggccacagattagcaaaagtacaagggtatttgttcagagctgcattccttcggcga
gttccaacctttacacatctgattattgaaaatcttcttctatgctttctccaatccaca
atatatcagacgtcaaagtacttgacagggtcattaggcttgcgcttcaagaaaattttg
acggatcttgtccatgctgattattttgagaacatggtgtactacaagatctcgcatgtt
gatcatcggatctcaaacccagagcaaagaattgcaagtgatataccaaagttctgctcg
gaactaagtgaccttgtacaagatgatctggcagcaattgcagaagcgttaatatatatc
tggcgcctctgctcttatgcaagtccgaaatatgtattgtggattctggcatatgttata
ggtgctggtggtacaattagaaaattttctcctgcttttggtaagctgaagtctatggaa
caacagctagagggggaatatcgccaggtccattcacgattgagaacacatgccgagagt
gtggcattttatggtggtgaaaacagagaagcatcgcatattatgcagcggtttggggca
cttgttaagcacttgaatgttgttctccatgaaaactggtggtttggcatgattcaagat
tttcttctgaagtatcttggtgccactgtgggagttatcctaattatcgaacctttcttt
gcggggaatcttagacctgaatcatccaccttaggacgggcagagatgttgagcaatctc
cgataccacaccagtgtgataatatcactatttcagtctcttgggaccctttctatcagt
tcaaggcgcttaaatattctcagtggctatgctaatcgtattcatgagttactggaggtc
tcccgtgagctatctggtgttcgtgatagattgatgactcaaaattcttctgctgcaaat
tatatcagcgaggcaaattatatagagttttcaggtgttaaggtggtgacaccctctggg
aatgttttggttgatgatttgacgctccgattggagtcaggctctaacctgttgatcaca
ggccccaatggtagtggaaaaagctccctattccgtgttcttggtggtctgtggccgctg
gtatctggtcatattgtcaaacctggtgttggttctaatctcaacaaggaaatattttat
gtgccccagagaccatatacagctgttggaacacttcgtgaccagttgatctatccgctt
acagcagaccaggaaactgaaccactcaactatagtggcatggtggatcttctaaagaat
gttgatctagaatacttgctagaacgctatcctcttgataaggaagttaactggggtgat
gaattgtctcttggcgagcagcaaagattaggaatggctagactgttctatcataaaccc
aagtttgctatcctggatgaatgcactagtgctgtgacaattgatatggaagaacgtttc
tgcaaaagggttcgagcaatgggcacatcatgcataacaatatctcaccgtccagcatta
gttgcatttcatgaaattgttttatccttggatggtgaaggagggtggaatgtgcaggac
aacagaaatggttcatccttctcccctgaagtagaggttgatgtgttgaagtcatcagaa
actgatcgcaaatctgatgcacttactgttcaaagggcttttgtcaccagcacaaagggc
aatgcatcatcaaagctcaagaagcagtcctattcaacagaggtgatagcatcttcccct
agtatggagatagaacatacagtacaagcacctatcgtaacacaattgaaatgctctcca
agacctttgcctgtcagagttgctgcaatgtctcaaatactggttccaaagctgtttgat
aaacaaggagggcagctacttgcagtggcagtactagtattttcccgtacttggatttcg
gatcgtatagcttcactgaatggaacaagtgtcaagtatgtcttggagcaggacaaagct
gccttcattcgtttgactggcataagtgtgctgcaaagtgccgcaaattctatcgtgtca
ccctcactaagaaatcttacttcaagaattgcccttggatggcggattcgcatgaccaac
catctacttcaatattatttgaaaagaaatgctttttacaaggtattcaacatttcgggc
atgaatatggatgcagaccaaagaataacacatgatgtagagaagttgaccaatgatctt
gctggcttggttactggaatggtgaagccactagttgacattctttggtttacatggaga
atgaagcttttgtctgggcgaagaggagttgctatactatatgcttacatgttcctaggt
cttggttttctaagagctgtgtcccctgacttcggtgatcttgcaaaccaagaacaagaa
cttgaaggcacattcagattcatgcactcaagattgcggacacatgctgagtcaatagct
ttctttggtggtggatcaagggaaaaagctatgattgatgctaaattcacaacatggctc
aaccactcaaaggttctattgagaaaaaagtggctttacggtatttttgatgatttcgtg
acgaaacaactacctcataatgtgacatgggggcttagtttgttatatgctttggagcac
aagggagaccgagctttgacttcaacccaaggagagctggcacatgccctgcggttcttg
gcgtctgtggtgtcacaaagcttcatagcatttggtgatattcttgaattgcacaagaag
ttccttgaactttctggtggtattaacagaatatttgagcttgaggagcttcttcaggca
gcacaaagcaatcctgctgtgccttctgatgctattaaggccgcctccgaagaaatcatc
tccttccgtaatgtggatattgtaacaccatcacagaagctattggctagccaattgtct
tgtgatgtatctcaaggaaaaagccttcttgtgaccggtccaaatggtagtggaaagagt
tccatttttagggtgctccgaggtttgtggcccattgcttctggtagacttaccaagcca
tccgaaggaatttttaatgtccctcaacgtccatatacttgtcttggaaccttgagggat
cagatcatataccctctctcacgggaggaggcagagttgaagatgctttcacacgaaaca
agtgacaagtctgcagcttccaagatgttggatgatcacctgaagatgattctagagaat
gttcgcttggtgtatcttctagaaagagaaggttgggatgctactcctaactgggaagat
atcctatccttgggggaacagcagaggctggggatggctcgtttattctttcactgtcct
aaatacggcatccttgacgagtgcactaatgccacaagtgtggatgttgaggagcatttg
tacaggttagcaaccaacatgggcataacagtcatcacatcctcacaagtaacccctcgc
agtttatatctttctagttcatatctgagatatgtttgggggttgatggatgctgaagct
ttctgggcttcgtctcttcggcagggtccttcggcgtgcatcggcttcttcgttaactcc
ggctccgtttacgagtccggggagaccaccggcgtgtcgtacatgctggagaagatggcc
ttcaagggcaccaaccaccggaggcaccgcaacctcgtgcacgagctcgagcttgctgga
ggcaatgtcggtgcctcctattccagggagcagatggtctacagctatgacacgctcaag
ggctacatgccagaggctattgagatactcatcgactgcatgcgcaacccgctcttcctc
caggaagaagtcgagcgccagttggtccttgctcgagaggaagtccaggacctgcacaag
aatcctgagaagtttcttcatgaacagcttaaccttgttggattttcaggtgcacttgca
aatccgctaatacctcctgaggatgctctttcgagaatcaatgacaagattattcaaaag
ttttatcatgaaaactataccgctgatcgtgtggttctagcagcatctggtgttgatcat
gaacaattgctaaactatgctgaatttttgttgcgtgattggcacaaggggtcacctgtg
gaaaaaccaaagtctacatacgtgggtggtgattccagatacagagcagattcagatatg
acgcatgttgcattagcttttgaagtgccaggtggctggcttcaagaaagagatgctaca
attatgaccatcatacagactttaatgggtggtggtggttcattctcctctggcggtcct
gggaaagggatgcattcacggctctatctacgggtcctcaataaatatcatgctgtccaa
tctttttcagcatttagtaatgtatatgacaatactggcctctttggcatctacttgacc
acgtcatcagattttgttgcaaaggctgttgatgttgcaataagtgaattgattgctgtt
gcaacacctggagaagtgacagaggttgaactgcaacgagcgaaaaactcaacaatttca
tccgtattaatgaatctcgaatccagggtaattgttgcagaagatattggaaggcagctg
ttgacttatggttgcaggaagcctattgattacttccttcagtgtatggaagaaattact
ctagatgatatcacaacatttgccaggaagatgttatcttcgcaacccacaacggttagc
tggggagatgttgacaaagttcctccgtacgaatttgtttgcaagcggttccggtag
DBGET
integrated database retrieval system
