Shewanella japonica: SJ2017_2889
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Entry
SJ2017_2889 CDS
T04959
Name
(GenBank) tRNA s(4)U8 sulfurtransferase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
sja
Shewanella japonica
Pathway
sja00730
Thiamine metabolism
sja01100
Metabolic pathways
sja01240
Biosynthesis of cofactors
sja04122
Sulfur relay system
Module
sja_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SJ2017_2889
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SJ2017_2889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_2889
Enzymes [BR:
sja01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SJ2017_2889
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SJ2017_2889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
ARD23167
LinkDB
All DBs
Position
complement(3421118..3422572)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMMKSKTVRMRFTKILETNIRNVLKKVDDDVKVQRQWDRIMIHVASDEQA
RIDAISARLKCIPGIAHVIQVDEYSFESIDDIYQQVLPVYKDELAGKTFCVRVKRTGKHD
FNSIEVERYVGGGLNQHTDAVGVKLKNPDMTVNLEIDHEKLYMVVRRIEGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWQKYGESHKVR
FITVPFEPVVEEILEKIDNGQMGVILKRVMMRAATKIAEKYGIQALVTGESLGQVSSQTL
TNLNVIDRCTDLLILRPLITMDKQDIINESRKIGTEDFAKAIPEYCGVISQKPTVKAILS
KIEAEELKFSEDLVDRVVNDAVVIDIKQIAEKVETTVSETETVAAIDNDEVVIDIRAQDE
EEQNPLKIADTEILKIPFFKLATQFADLSKEKTYLLYCDRGVMSKLQALYLTEQGYTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgtaaagctatacccagaaatcatgatgaaaagtaaaacggtgagaatg
cgttttactaaaatccttgaaacaaacattcgcaatgtacttaaaaaagttgatgacgat
gtaaaagtgcaacgccaatgggatcgtatcatgatccacgtagcgagcgatgaacaagca
agaattgatgcgatttcagctagattaaaatgtatccctggtattgctcatgtgattcaa
gttgatgaatactcatttgagtcaattgatgacatttaccagcaagttttgcctgtatat
aaagatgaactagcaggtaaaaccttctgtgttcgtgttaagcgaacaggtaaacatgat
ttcaattcaattgaagtcgaacgttatgtcggtggtggtttaaaccagcacactgacgct
gttggcgtgaagttaaaaaatcctgatatgacagtgaatcttgagattgatcatgaaaag
ctatacatggttgtacgtcgtattgaaggtctaggtggcttccctatggcgactcaagaa
gatgtgttatcacttatttcgggtggttttgattctggtgtttctagctatcagtttatc
aaaaagggcgcacgtacacattactgtttctttaacttaggtggcgctcaacatgagatt
ggcgttaaacaagttgcttaccacttatggcaaaagtatggagaatctcataaagttcgt
tttatcacagtgccttttgagccagttgtagaagagatccttgagaaaatcgacaatggt
caaatgggcgttattttaaagcgtgtgatgatgcgtgcggccactaaaattgccgagaaa
tacggtattcaagcactagttacaggtgaaagtctcggtcaagtttcaagtcaaaccttg
actaacctcaatgtaatcgaccgttgcaccgatttattgattctgcgtccactgatcacc
atggataagcaagatatcattaatgaaagccgtaaaattggcacagaagattttgctaaa
gctattcctgaatattgtggtgtgatttcacagaaaccaacagtgaaagccattttatct
aaaattgaagctgaagaattgaagttttcagaagatcttgtcgatagagtcgttaatgac
gctgtcgtgattgatatcaagcaaattgcagaaaaggtcgaaacaacggtaagtgaaact
gaaacagtcgctgcaatcgataatgacgaagtagttattgatattcgtgctcaagatgaa
gaagagcaaaatccgctaaaaatagctgatacagaaatattgaagatccctttcttcaaa
ctagccactcaatttgcagacttaagtaaagaaaaaacttacctattgtattgcgatcgt
ggtgtgatgagtaaattacaagctctgtatttaactgagcaaggctacactaacgttaag
gtttaccgtccttaa
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