Shewanella japonica: SJ2017_3200
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Entry
SJ2017_3200 CDS
T04959
Name
(GenBank) S-ribosylhomocysteine lyase
KO
K07173
S-ribosylhomocysteine lyase [EC:
4.4.1.21
]
Organism
sja
Shewanella japonica
Pathway
sja00270
Cysteine and methionine metabolism
sja01100
Metabolic pathways
sja01230
Biosynthesis of amino acids
sja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SJ2017_3200
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJ2017_3200
Enzymes [BR:
sja01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.21 S-ribosylhomocysteine lyase
SJ2017_3200
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Motif
Pfam:
LuxS
DUF1805
Motif
Other DBs
NCBI-ProteinID:
ARD23467
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Position
complement(3794666..3795175)
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AA seq
169 aa
AA seq
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MPLLDSFTVDHTRMEAPAVRVAKHMSTPKGDTITVFDLRFCTPNKDILSERGIHTLEHLF
AGFMRDHLNGDNVEIIDISPMGCRTGFYMSLIGVPSERIVADAWLAAMEDVLKVVEQTEI
PELNEYQCGTFEMHSLEQAQDIARAIIAAGVSVNRNDDLKLSDDILGTL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacttgatagtttcaccgttgatcatactcgaatggaagcaccagctgtacgt
gtagcgaagcatatgagcacaccaaaaggtgacaccattacagtatttgatttacgtttt
tgcacccctaacaaagatattctaagtgagcgtggtatccatactttggagcacttattt
gcaggctttatgcgtgaccatcttaatggagacaatgttgagattatcgacatttcccct
atgggatgtagaacgggcttttatatgagccttattggtgtgccatctgagcgtatcgtt
gctgatgcatggttggctgccatggaagatgtactaaaagtagttgaacaaactgaaatt
cccgagttaaacgaatatcaatgtggcaccttcgaaatgcattcattagagcaagcacaa
gatattgcacgtgcgattattgcagcgggtgtaagtgtgaatcgtaatgatgacttaaaa
ttgagtgatgatattttagggactttataa
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