Streptomyces janthinus: RI060_10855
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Entry
RI060_10855 CDS
T09385
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjn03009
]
RI060_10855 (rimO)
Enzymes [BR:
sjn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RI060_10855 (rimO)
Ribosome biogenesis [BR:
sjn03009
]
Prokaryotic type
ribosomal protein modification factors
RI060_10855 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WND17812
LinkDB
All DBs
Position
complement(2420903..2422381)
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AA seq
492 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWHLVEAAEDADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLQTIL
NGGIHASHTPRDRRKLLPISPAQRQESAAGVALPGHAPADLPEGLAPASGPRAPLRRRLD
GTPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPGVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGESEADLAELERFLN
GARLDAIGVFGYSDEEGTEAATYENKLDEDVVAERLARVSRLAEELVSQRAEERLGQTVH
VLVESVDEEGVYGRAAHQAPETDGQVQLTSGAGLGSGRMVEAKVVGTEGVDLVAEPLQGS
FASPAWSEEAGR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactggtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtttggaggcggacggctggcacctcgtggaggccgccgag
gacgcggacgtcgccgtcgtgaacacctgcggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaaggggcacggcagaacccaggccgtggtg
gcggtgggctgcatggccgagcggtacggcaaggaactcgccgaggctctccccgaggcc
gacggcgtgctcggtttcgacgactacacggacatctcggaccggctccagaccatcctc
aacggcggcatccacgcctcgcacacaccgcgcgaccggcgcaagctgctgccgatcagc
ccggcgcagcgacaggagtccgccgccggggtcgcgctgcccgggcacgccccggccgac
ctcccggaaggcctcgctccggcctccggtccccgcgcgcccctgcgccgccgactggac
ggcaccccggtggcctccgtgaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcccgccgcccgagcgacgtgctgaacgag
acgcggtggctggccgagcagggcgtgaaggagatcatgctggtctccgagaacaacacg
tcctacggcaaggacctgggcgacatccgcctgctggagtcgctgctgcccgagctcgcc
gaggtcgacggcatcgagcgggtccgggtgagctacctgcagcccgccgagatgcggccc
ggcctgatcgacgtcctgacctcgaccccgaaggtcgcgccctacttcgacctctccttc
cagcactccgcacccggtgtgctgcgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggaactgctcgacaccatccggagcaaggcgcccgaggccggcgtgcgctccaacttc
atcgtcggtttccccggcgagagcgaggccgacctcgccgaactggagcggttcctgaac
ggcgcgcggctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacgagaacaagctcgacgaggacgtggtcgccgagcggctggcccgggtctcg
cggctggccgaggaactcgtctcgcagcgcgccgaggagcgcctcggccagacggtgcac
gtgctcgtcgagtccgtcgacgaggagggcgtgtacggccgcgccgcgcaccaggcgccc
gagacggacggccaggtgcagctcacgagcggcgcggggctcggcagcggtcgtatggtc
gaggcgaaggtggtcggtacggagggtgtcgacctggtggccgagcccctgcagggttcg
ttcgcgtcgcctgcgtggagtgaggaggcgggcagatga
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