Scomber japonicus (chub mackerel): 128354595
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Entry
128354595 CDS
T09718
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00310
Lysine degradation
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128354595 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128354595 (setdb2)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
128354595 (setdb2)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128354595 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128354595 (setdb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
128354595
NCBI-ProteinID:
XP_053170785
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All DBs
Position
24:1146468..1156085
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AA seq
627 aa
AA seq
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MEAKCVDASAAEQARSFWSKEDVDQVFSSVLSYLDHLKKALKSNTATDKELAASWKLLEC
LDWSSGAPAAMQDASVVQVVIGSVEFSRRSPPPPSTNGLSGSAAPPAGKDELLPPLSTVQ
LQYHQHCCCRSCLPSLPSMPQSTPPFWGQNPFRVPLLCGFKRLTAAQMTSPRGGEEEEED
EEEEEEGEDDVIYKAPCGQSLRNYDDVMRFLLATESYGVLQVDFFSFNPSVRFDVPVATG
PRHPELDLSRGLEPTPVELCAGDSGARPADFRYRKDRWPHGCFLSRGPTLFSTCCDCTDG
CSDTKRCACMARTRGGRHYSHHRLMEPVTSGVYECGPWCGCDRALCQNRLVQRGIRVRLQ
VFQTEGRGWGVRCRDDLDHGTFVCIYAGVILQRVQSADDLAPPKLMRSDLPSDDDVEVVT
EWLAPPVLEGRSDLEAPPPKTPPTSPPLHVPVIQRPADAASTQQDRDKSQAASPSGDQRP
RPQETVTMTTGSRLVTMTTGSRLETLRKRKMKMEDVYLLDASKEGNVSRFFNHSCDPNLF
VQNVFTDSHDPSFPLIAFFTSRVVKAGTELTWDYSSHPQSVSSHRQEVRCVCGGDECRGQ
FSVEEKVCDVCVCGGGGEGDRMFLFCL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaagtgtgtcgatgcttcagctgcagagcaggctcggagcttctggtcgaag
gaagacgttgatcaggtgttcagctccgtgctcagctacctggatcacctgaagaaagcc
ctgaagtccaacacagccacagataaagagttggcggcgagctggaagctgctggaatgt
ctcgactggagcagcggagcgccggccgccatgcaggacgcgtctgtggtgcaggtggtg
atcggttcagtggagttttcccgccggagccccccccctccctccaccaatgggctgtct
ggctctgcagcgccacctgcaggcaaagatgagctgctgcctccactgtccaccgtacag
ctccagtaccatcaacactgctgctgcaggtcctgcctgcccagtttacccagcatgcct
cagtccacgcctccgttctggggtcagaacccgttcagggtgccgctgctttgcggcttt
aagaggctgaccgccgcgcagatgacgtctccgcgggggggcgaggaggaggaggaagat
gaggaggaggaggaggaaggggaggatgatgtcatctacaaagcgccgtgtggacagagc
ctccgtaactatgacgacgtgatgcgcttcctgttggccacagagagctacggcgttctg
caggtggacttcttcagctttaacccgtctgtccggttcgacgtccccgtggcgacgggc
cctcgccacccggagctggacttgagtcggggtttggagccgacgccggtggagctgtgt
gccggcgacagcggcgctcggcccgctgacttccgctacaggaaggaccgctggccgcac
ggctgcttcctgagccgcggccccacgctgttcagcacctgctgcgactgcacggacggc
tgcagcgacaccaagcgctgcgcctgcatggccaggaccagaggggggcgccattactcc
caccacagactgatggagcccgtcacctcgggtgtgtatgagtgtggtccgtggtgtggg
tgtgatcgggctctctgtcagaaccggttggtccagagggggatccgagtccgtctgcag
gtcttccagaccgagggccgcggctggggcgtgcgttgccgtgacgacctggaccacggg
acgttcgtgtgtatctacgcaggtgtgatcctgcagcgcgtccaatcagctgatgacttg
gctcctcccaaactgatgaggtcagacctgccgtcagacgatgacgtcgaggtcgtcacc
gagtggttggctcctcccgtcctcgaggggcggagcgacctggaggccccgccccccaag
accccgcccacttcccccccgctgcacgtccccgtcatccagagacccgccgacgccgcg
tccacccagcaggacagagacaagtctcaggcggcatctccgtcaggtgaccagcggcct
cgccctcaggagacggttaccatgacgacgggctccaggctggttaccatgacgacgggc
tccaggctggagaccctgaggaagaggaagatgaagatggaggacgtttacctgctggac
gccagcaaggaaggaaacgtcagccgcttcttcaaccacagttgtgatccaaacctgttc
gtacaaaacgttttcaccgactcccacgacccgagcttccctctcatcgccttcttcacc
agcagggtggtgaaggctggcactgagctcacctgggattactcctcacaccctcagagt
gtgtcgtcacacagacaggaagtgaggtgtgtgtgcggcggtgacgagtgtcggggtcag
ttcagcgtggaggagaaggtgtgtgatgtgtgtgtgtgtggaggaggaggagaaggagac
cggatgtttttgttctgtttataa
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