Scomber japonicus (chub mackerel): 128358354
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Entry
128358354 CDS
T09718
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128358354 (spata5l1)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
128358354 (spata5l1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128358354 (spata5l1)
BRITE hierarchy
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_14
AAA_33
TIP49
AAA_7
bpMoxR
NACHT
NTPase_1
RNA_helicase
Mg_chelatase
Rad17
nSTAND3
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
128358354
NCBI-ProteinID:
XP_053174576
LinkDB
All DBs
Position
1:29736284..29741085
Genome browser
AA seq
746 aa
AA seq
DB search
MMTLKLLSVDPSDRGSQRCRLGPGLMSALGLSLGSPLLVSVPGGSCLCTAWPRPDLAEGF
LQMDLRCSSPSLISHPPTHLNLDPEQLTPTPCPKLKGVKITVVVQSVEFKKNTPMRLVHE
LVKDMLKGVYVQKRHVINLEDIDTEIRYVVVESITPDTSSAGLINSKTGMEITGIQTVRH
YRNQLQDQHTVVLGGLEEVSASLREMLQLPLLYPGTLSSLGVLCPRGVLLVGPPGVGKTL
LVRRVVGDVGASLVVVKGPEVVGTRPGESEEMLRAVFERARTAAEEGPCVLFLDELDSLC
PRRTGSSAPENRLVAQLLTLMDGMNQSDRFLIVGATNRPDSLDPALRRPGRFDREVVIGA
PTLQQRRAILSVLCERMPVCPSVDLAELAQRTTGYVGADLSALCREAAMHSIRENSKGSG
QQAVSVKHFHEALKSVRPSCLRGSLGRTDLSPVSWEQIGGLDEIKLKLKQSIEWPMMYPE
AFVRLGLCRPRGVLLYGPPGCAKTTLVRAAATTSHCAFLSVSGADLYSPFVGDSEKALAQ
LFRQARACSPCILFLDEIDSLIGSRSNSQTPNSVQTRLLSVLLNEMDGIGLKTVESRGTE
KILEGADHNHTQDQLDFQEVCNKDVMVVAATNRPDCLDSALLRPGRLDHIIYVPPPDQQA
RLAILKLRTESMPVEPDVCLEELASKTDLYSGADLENLCKEAALLALQEENMEASAIKHT
YFLRSLNKMSPSLTAQQIHKYQTSPR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatgactctcaagctgctgtccgtggatccatcagaccggggctctcagagatgcagg
ctgggtccaggcttgatgtcagcgctgggtctgagcctgggctccccgctgctggtgtct
gttcctggtggaagctgcctgtgtactgcctggcccagacctgacctggctgagggcttc
ctgcagatggatttgagatgctcctctcccagtctaatctctcacccacctacacacctc
aacctggaccccgagcagctcacacctacaccctgccccaaactgaaaggcgtaaagata
accgtggtcgtccagagtgttgaatttaagaaaaacacacctatgcgccttgttcatgag
cttgttaaagacatgctgaaaggtgtatatgtgcagaagaggcatgtgataaaccttgag
gatattgacacagagattagatatgttgttgttgaaagcatcactccagatacaagcagt
gctggactcatcaactcaaaaacaggtatggagataactggcatccagacggtcagacac
tacaggaaccagctgcaggaccagcacacagtggtattggggggcctggaggaggtgagt
gcctccctgagagagatgctgcagctgcctctgctctatccaggcacactaagctctctg
ggtgtgttgtgtcccagaggcgtgctcctggtggggcccccaggtgtggggaagaccctt
ctggtccgcagagtggtgggggatgtgggagccagcctggtggtggtcaaagggccagag
gtggttgggacacgaccaggggagagcgaggagatgttgcgggctgtttttgagcgggct
cgcactgcggccgaagagggtccatgtgtgctgttcctagatgagttggactctctgtgt
ccgaggagaaccggctcatcggcaccagagaaccgcctggtagctcaacttctcacacta
atggacgggatgaaccaatccgatcgcttcctcattgtcggagccactaaccggccagac
agcttagaccctgcactgcgaagacctggaagatttgacagagaggttgtcatcggagct
cccaccttgcagcagaggagagccatcttgtccgttctgtgtgagcggatgccggtgtgt
cctagtgtggacctggctgagctcgcacagagaaccacaggctatgtaggagcagacctc
agtgccttgtgcagggaggccgccatgcactctatacgggaaaactccaagggttcagga
cagcaagcagtgagtgtgaagcacttccatgaggccctgaagtcggtgcgtccctcctgc
ctgcggggcagtctgggcaggacggacctctctccagtgtcttgggagcagataggaggc
ctggatgagatcaaactcaagctaaaacagagtattgagtggccgatgatgtaccccgag
gcttttgttcgtctgggtctatgtcgaccccgtggcgtactgctctacggacctccaggt
tgtgctaagacgacactggtcagagcagctgccaccacatcccactgtgccttcctgtct
gtcagtggtgctgacctctactctccctttgtgggagactcggagaaggctttagcacag
ctctttcgccaagcacgagcctgttctccctgtatcctgttccttgatgagattgactct
ctgattggctcacggtcaaacagtcagacacctaacagtgtacagacacgccttctgtct
gtgctcctgaatgagatggatggaattggcctgaagacggtggagagcagagggacggag
aaaatccttgagggtgcagatcacaatcacacgcaggatcagctggacttccaagaagtg
tgcaacaaagatgtgatggttgttgctgccacaaacagacctgactgcttagacagtgcc
ctcctgcggcctggcagactggaccacatcatctatgtcccaccacctgatcagcaggct
cgtcttgccatcctgaagttgcgcacagagtcgatgcctgtagaacctgacgtgtgtctg
gaagaactggcttccaagactgatctttactctggagccgacctggaaaatctgtgtaaa
gaggctgctctgttggcgcttcaagaggaaaacatggaagcttctgccatcaaacataca
tacttcctgcggtccctcaacaaaatgagcccctctctcactgcccagcagatccacaaa
taccaaacatctccaagatga
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