Scomber japonicus (chub mackerel): 128359306
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Entry
128359306 CDS
T09718
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00071
Fatty acid degradation
sjo01212
Fatty acid metabolism
sjo03320
PPAR signaling pathway
sjo04148
Efferocytosis
sjo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
128359306 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128359306 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128359306 (cpt1b)
03320 PPAR signaling pathway
128359306 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128359306 (cpt1b)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
128359306 (cpt1b)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128359306 (cpt1b)
BRITE hierarchy
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
128359306
NCBI-ProteinID:
XP_053175756
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Position
5:20369449..20378667
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AA seq
787 aa
AA seq
DB search
MAEAHQAVGFQFTVRPDGVDLKLSQEVIKNIYLSGVTAWRKRAIQFKNGVLTGVYPASPS
SWLIVVIAMMSTLYIRVDPSLGMIDVIKENLLYRDCMSVQTRAVLSAILFATGLWLFLIY
LLRYTLKGLLSYHGWIFESHGKMSSSTKVWLSLVKMFSGRRPLLYSFQASLPRLPVPSVD
ETIQRYLESVHPLLDSEKYKQMEILASDFKNTKAAQLQRYLILKSWWATNYVSDWWEEYI
YLKGRSPIMVNSNFYIMDLLYMTPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRAVGTV
PMCSNQMERMFNTTRIPGIETDFVQHLTDRKHLVVYHKGRFFQLWLYTGGRHLLPSELET
QFQRILNDTSEPQPGELKLAALTAGNRIPWARARIKYFSQGVNKVSLDAIESAAFFLALD
EEPQGYDPAKTNSLDGYAKSLLHGKCYDRWFDKSFTLISYPNGKMGVNVEHSWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDVNKGLPHPTRLQWQIPKECQEVIETSYLSAKQTAD
DVDFHGYVFADFGKGLIKKCRTSPDAFIQLALQLAQFRDQGVFCLTYESSMTRMFKDGRT
ETVRSCTPEAVAFVRAMEDAGATKTQRLALFRKAADKHQNMYRLAMTGSGIDRHLFCLYI
MSKYLGLDSPFLKQVLSEPWKLSTSQTPQQQLNLVDINKFPKYVGAGGGFGPVADDGYGV
SYIIVGENLVTFHISCKFSCPDTDSCRFGQNIQKAMIDIQALFKPENDKKTAEHVKHMQL
ENGKKHI
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcgcatcaggcggtgggcttccagttcaccgtgcgcccagatggtgttgac
cttaaactaagtcaagaggtcatcaaaaacatctacctgtcaggggtgacagcatggagg
aagcgagccatacaattcaagaacggtgtattgactggagtctaccctgctagtccgtct
agttggctgattgttgtgattgcaatgatgagtaccttgtatatccgcgtagacccctct
ctaggaatgattgatgtcatcaaggaaaatctgctatacagagactgtatgtcagtccag
acccgagcagtgctgagtgccatcctgtttgcaactggactgtggttgttcctcatttat
ctcttgagatacactctgaaaggtctactgtcctaccatggctggatatttgaatcccat
ggaaaaatgagctcgtccaccaaagtgtggttgagcctagtgaagatgttctctgggcgc
agaccgctgctttacagcttccaggcctccttacccagactccctgtgcccagcgtggat
gaaacaattcagaggtaccttgaatcagtacatcctctgctggacagtgaaaagtacaag
caaatggaaattttggccagtgactttaaaaataccaaggcagcccagctccagagatat
ttaatcctaaaatcctggtgggcaacaaattatgtaagtgactggtgggaggagtacatc
tacctcaagggcaggagccctatcatggtcaacagtaacttctatataatggacctcttg
tacatgaccccaacacatcgacaggctgcacgagcaggaaatgtggtccatgcaatgctg
cagtacagacgcaaactggagcgcggtgaacatgcaccgctgagggctgtggggactgtt
cctatgtgctccaatcagatggagaggatgtttaacaccacccgtatccctggcattgaa
acagattttgtgcagcacctgactgaccgtaagcacctggtcgtctatcacaaaggccga
ttcttccaattgtggttgtacactggagggcgccacctcttacccagtgaacttgagaca
caatttcaaaggatcctcaatgacacatcggaaccacaacccggagaactgaaattagct
gccctgactgcaggaaacagaatcccatgggcacgggctcggattaaatatttcagccag
ggagtgaacaaagtgtccctggatgccattgagtcagctgccttcttcctggcactagat
gaggaaccacagggttatgaccctgcaaagaccaattcgcttgacggttatgccaagtcc
ctgcttcatggaaaatgttacgacaggtggtttgacaagtcttttaccctgatttcttat
ccaaatggaaaaatgggtgtaaatgttgaacattcttgggctgatgcaccaattgtagga
catatgtgggagtatgtccttgcaacagactgctttcatctgggctacacagaggaggga
cactgcaaaggagatgtgaacaagggcctgcctcatcccactcgactacagtggcagatt
ccaaaggagtgccaagaagtcattgagacttcatacctatcagccaaacagacagctgat
gatgtggacttccatggctatgtgtttgcagactttggaaaaggcctgatcaagaagtgc
aggacaagccccgatgcctttattcagctggccctgcagttggcacagttcagggatcag
ggagtgttctgcctgacatacgagtcatcaatgactcgtatgttcaaagatggtcggaca
gagacagtacgttcctgcacccctgaggctgttgcatttgtcagagccatggaggacgca
ggtgcaacgaaaactcagagacttgccctgtttcgaaaggcagcagataagcatcaaaac
atgtaccgcctggccatgactggttctggtatcgaccgtcacctcttctgtctctacata
atgtccaaatatcttggtcttgactccccatttcttaaacaggtactttcagagccatgg
aagttgtccaccagccagactcctcagcagcagctcaacttagttgacatcaacaagttc
cccaaatatgtgggtgcaggtggtggatttggcccagtggctgatgatggttatggtgtg
tcatatattattgtaggggaaaacctcgtcacattccacatctcctgcaagttctcctgc
cctgacacagattcgtgtcggtttggtcagaacattcagaaggccatgattgatatccaa
gcacttttcaagcctgaaaacgataagaagacagctgagcatgtgaagcatatgcagctg
gaaaatgggaaaaagcacatataa
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