Scomber japonicus (chub mackerel): 128360135
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Entry
128360135 CDS
T09718
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3b isoform X1
KO
K09381
paired box protein 3/7
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128360135 (pax3b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128360135 (pax3b)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
Homeobox_KN
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
128360135
NCBI-ProteinID:
XP_053176460
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Position
6:8879131..8903868
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AA seq
500 aa
AA seq
DB search
MTALAGSIPRMMRPTLAQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVDKRIEE
YKRENPGMFSWEIRDKLLKDGICDRNNVPSVSSISRIMRSKFGGKGDEEEDEDEIEKKEL
EDNERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSIPPYQLSDSAYPPSSIAQVSEPPSTVHRPQPLPPSSGHQASGGGGQGDGGSAYCLASG
RHSFSGYSDSFVSPGGPANPMNPAIGNGLSPQVRYQVMGLLNPGGVPHQPQSDYAISPLT
GGLEPPAGMAASCSQRMDHIKGLEGLTSVPSMSALPSLPSSQSYCPPSYSSPGYTVDHVA
SYQYGQYGQSALSYLRPEIT
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggcggggtcaatacccaggatgatgcgacccacgctggctcagaattac
ccccgcagtggcttcccactggaagtgtctactccgttgggtcaaggccgagtgaaccag
ctcggaggagttttcataaatggcagacctttgcctaaccacatccgacacaagatcgtg
gaaatggcccaccacggcattaggccgtgcgtcatctcccgacagctccgggtctctcac
ggctgtgtgtccaaaatactttgccggtaccaggagacgggctccatcagacccggggcc
atcggtggcagcaaacccaagcagggaacgacgccggacgtagacaagagaatagaagaa
tacaagcgggaaaacccgggtatgtttagctgggagattcgggataaattactgaaggat
gggatatgtgaccgcaacaacgttccttcagtgagctccatcagtcgcatcatgcggagt
aagttcggaggcaaaggcgatgaagaggaggatgaggatgaaatcgagaagaaagagctg
gaagacaacgagcgaagggccaaacacagcatcgaaggcatcttaggagacagatcgagc
cactcagacgagggttcggacgttgagtcggagcctgatctgccactgaagaggaaacag
cggcgcagtcggaccaccttcacggccgagcagctggaggagctggagagggccttcgag
agaacccactaccccgacatctacaccagggaggagctcgcccagagagccaaactcact
gaggccagggtgcaggtatggttcagcaacaggcgggcaaggtggaggaagcaagcggga
gccaatcaactgatggcgtttaatcacctgatcccagggggtttcccaccctcagccatg
tccagcatccccccataccagctctctgacagcgcctaccccccctcatcaatagcacaa
gtctcagagccccccagcacggtgcatcggccccagcctctccctccttcctcgggccac
caggcctccggcggtggaggacagggagacggaggttctgcctactgcctcgcctccgga
cgccactccttctcaggatactcagacagctttgtgagccctggaggaccggccaatccc
atgaaccccgccataggaaatggcctctctccacaggtgaggtatcaggtgatgggcctg
ctgaaccccggcggcgtgccacatcagccccaaagtgactacgccatctcccctctgacg
ggcggcctcgagccccccgccggcatggccgccagctgcagccagcgcatggatcacatc
aagggtctggagggtctgaccagcgtcccctccatgtccgctctgccctccctgcccagc
tcccagtcctactgccccccctcctacagctcacccggctacacagtggaccacgtggcg
tcctaccagtacggccagtacggacaaagtgccctttcttatctgaggcctgaaatcacc
tga
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