Scomber japonicus (chub mackerel): 128364471
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Entry
128364471 CDS
T09718
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128364471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
128364471
NCBI-ProteinID:
XP_053180970
LinkDB
All DBs
Position
9:complement(12655511..12700282)
Genome browser
AA seq
2522 aa
AA seq
DB search
MHIFFAKLTFLLSLIGLTRGQRCFMPMESCLNQGRCEATSDGNGECKCRTGFAGDRCQFR
DPCVPSSCMNGGSCATVSKGDRMDFTCTCRPGFTDRLCMTPTTNVCFSLPCRNGGICEVE
TLQTYKCRCPPGWSGKQCQQADPCASNPCANDGQCSAIESHYICTCTPFFSGKTCTQDVN
ECDVSPSPCKNGGACINEVGGYRCQCPAEYTGRFCESRYLPCNPSPCHNGGTCIQKGETN
YECSCVPGFTGKNCNHNIDDCPGHECHNEGICVDGVNTYNCQCRPEFTGQLCTEDVDECQ
LMPNACQNGGTCHNTYGSYQCVCVNGWTGDDCSENIDDCASAACHHGSTCHDRVASFFCE
CPHGRTGLLCQLDDACISNPCQKGSNCDTSPVSGNHFCTCPPGYVGTSCDQDVDECSLGS
NPCEHAGKCINTKGSFQCKCQRGYVGPRCELDINECMSNPCRNEATCLDQIGDFHCICMP
GYEGEFCEIDTDECANSPCLNNGKCIDKINTFLCQCPTGFTGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCECTEGYSGKHCETDIDECYSFPCHYGTCIDGLASFSCQCKPGYTGRLC
ETNINECLSQPCRNGGTCQDRENSYICSCPKGTTGINCEINIDDCKSNPCDYGTCIDKIN
GYECACEPGYTGTMCNINIDECAINPCHNGGTCIDGINSFTCACPEGYHDATCFSQVNEC
LSNPCIHGHCEDKINGYNCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGMCIDDVAGYKCICILPYTGENCEILMAPCSSKPCKH
GGVCQESEDYQSFSCECPEGWQGQTCEVDIKECVKNPCLNGATCQNTMGSYRCGCKPGFT
GRNCETNVDDCKPNPCSNGGLCKDEVNGFLCTCLPGFRGTKCEEDINECESNPCKNGANC
TDCVNSYTCTCPAGFSGIHCENNTPDCTESSCFNGGSCMDGINTFTCLCPPGFTGSYCQH
DINECDSKPCQNGGTCQDSYGTYKCTCPHGYTGLNCQNLVRWCDSSPCKNGGTCWQQGTA
YKCECQTGWTGLYCDVPSVSCEVAAKQRGVAVTDLCRNSGQCLDAGNIHYCHCQVGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYTCKCLPGYVGTNCSDEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDPVTKEPKCFNKGKCVDRVGGYHCICSAGYV
GERCEGDINECLSNPCDPRGTHSCIQLTNNYRCECRTGYTGQRCDTVFDGCKGKPCHNGG
TCAVASNTPHGFICKCPPGFAGSTCEYDAQTCGNLHCRNGGTCISGQKSPKCLCTPSFTG
PECQYPTDSPCNSNPCYNGGTCEYISEAPFYHCVCPTLFNGLRCHILDHDFKGGPGDEIT
PPSVVEDVCEIPQCEERKHNKYCDVLCNNHACGWDNGDCSLNFNDPWKNCTASLQCWRYF
NDGKCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGQLVVVVHITPELLLNNSFGFLRELSRVLRTNVIFRKNLKGEMMVYPYY
GNEQELKKYNVKRSVDTWPEVPVKVLNVVKRSLYDVAGGSKRVKRELDHLQIKGSVVHLE
VDNRQCFQQSSECFQSTNDAAAFLGALASSGKLDVPYTIEAVFSGVDPEPSRPLYPIYLV
LAGVGILAFIGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNT
SDISLMDDTQNDWGEDEPSDAKRFRQFDEQAILEADDQTDHRQWTQQHLDAADLRIPSIA
PTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGA
NLHNQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAV
NNVEAAIVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANREITDHMDRLPR
DIAQERMHHDIVRLMDEYNLVRSPPMHGGSLSTTLSPPLCSPNGYLGSMKQPLPQGQGQG
KKARKPSTKGIGCKDGKDMKVKKKNSQDGKPGNLLDSSAVLSPVDSLESPHGYVSDVASP
PMMTSPFQPSPSVSLNHLQGMSDPHLAVNHMVMPNKQELARMQFDPLPPRLTHLPVSGSG
GQGAMNGQCDWLSRMHSNMSQPSQFNPMRGAPGGQGGLHQGGQHGLMTSLHNGHPNTSLS
QMMTYQGIQSTRLGPQPHIMQQQAQQIQQMQNLQQLQQQQQQQQQQTIQLQHQNSNTANS
QNFISGELGSPELQQGTGNSSMPIHTILPQETQIMTSSINQSMPSTQFLTPPSQHSYSGP
MDNTPNHQVQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSMQSQIGHIPEQ
FK
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttctttgcgaaactaactttcttattgtcgctgataggactaacacgaggc
caaagatgcttcatgcccatggagtcgtgtttgaaccaggggaggtgtgaagcaacttca
gatgggaatggagagtgcaagtgccggaccggatttgcaggagacaggtgccagttccgc
gacccatgtgtaccctcgtcatgcatgaatggtggctcgtgtgcgacggtgtccaagggg
gacaggatggacttcacctgcacctgcagaccgggcttcaccgaccgcctctgcatgacg
cccactaccaatgtttgtttctccttaccgtgtcgcaacgggggcatctgtgaggttgag
accctccagacatacaagtgccgctgcccgcctggatggtcaggtaaacagtgccaacaa
gccgacccctgtgcctcaaatccatgtgccaacgatgggcagtgctctgccattgagtcc
cactacatctgtacctgcacacccttcttctcgggaaagacctgcacacaggatgtcaat
gagtgtgacgtaagtccgtcaccctgcaagaacggcggagcgtgcatcaacgaggtcggc
ggctaccggtgccagtgtcccgcagagtacacgggcaggttctgcgagagccgttacctg
ccctgcaacccgtcgccctgtcacaatggaggcacctgcatccagaaaggagagacaaac
tatgaatgttcctgtgtgccaggtttcacaggaaaaaactgtaaccacaacatagatgac
tgtcctggacatgagtgccataatgaagggatctgtgtcgatggagtcaacacctacaac
tgccaatgtagaccagaatttacaggtcagctctgcacagaggatgttgatgagtgccaa
ctgatgcccaacgcctgccaaaatggtggcacgtgtcacaacacgtatggcagctaccag
tgtgtgtgtgtgaacgggtggacgggggatgactgcagcgagaacatcgacgactgtgcc
agtgccgcctgccaccatggatccacctgtcatgaccgcgtagcttctttcttctgcgaa
tgtcctcatggccgcacaggtcttctgtgccagctggacgacgcctgcatcagcaacccg
tgtcagaagggctccaactgtgataccagccccgtcagtggaaatcacttctgtacctgc
cctccgggctatgtcggtacttcctgtgatcaggatgttgacgagtgctctctgggttcc
aacccgtgtgagcatgcagggaagtgtataaacaccaaaggctcgttccagtgtaagtgc
cagcggggttacgtgggaccacgctgcgagctcgacattaacgagtgcatgtcgaacccg
tgcaggaatgaggccacctgcctggaccaaataggagacttccactgtatctgcatgcca
ggctacgagggggagttctgcgagatcgatacggacgagtgcgccaacagcccctgcctg
aacaacggcaagtgtatcgacaagatcaacaccttcctctgccagtgccccacaggcttc
actgggaacctttgccagatagacattgacgagtgtgccagcacaccatgcaaaaatggc
gccaagtgcacagacgggcccaacaagtacacctgcgagtgcactgaaggctactccggg
aagcactgtgagacagacatcgatgagtgttactctttcccgtgccactacggcacctgc
attgatggcctggcctccttcagctgccagtgcaagcctggttacaccggccggctgtgt
gagaccaacatcaacgagtgtctgagtcagccgtgcaggaacggcggcacctgccaagac
cgagagaactcgtacatctgcagctgccctaaaggcaccacaggaatcaactgtgaaatc
aacattgatgactgcaagagcaacccctgtgactatggcacctgcatcgacaagatcaac
ggctacgagtgtgcctgcgagcctggctacaccggcaccatgtgtaacatcaacatcgac
gagtgtgccatcaacccttgccacaatggcggcacctgcattgacggcatcaacagcttc
acctgcgcgtgtccagaaggttaccatgacgccacctgcttctctcaggtcaacgagtgc
ctcagcaacccctgcatccacggtcactgtgaggacaagatcaacggctataactgcctg
tgtgactctggctggagcggtaaaaactgcgacatcaacaacaatgagtgtgaatccaac
ccgtgtatgaacggaggcacctgcaaggacatgaccagcggatatgtttgcacctgtcgc
atgggcttcaccgggccaaactgccagaccaacatcaatgaatgtgcctccaacccttgc
ctcaatcaggggatgtgcattgacgacgtcgcaggctacaagtgcatctgcatcctgcct
tacactggagagaactgtgaaatcttgatggcaccctgcagctccaaaccctgcaaacat
ggaggagtgtgtcaggagtcagaggactatcagagcttctcctgtgaatgtccagaagga
tggcaaggccaaacgtgtgaggtggacatcaaagagtgtgtgaagaatccttgtctcaat
ggagcaacctgccagaacaccatgggcagttaccgctgcggctgcaaaccaggcttcacc
ggacgcaactgcgaaaccaacgtcgatgactgcaagcccaacccctgcagcaatggaggc
ctctgcaaagatgaggtgaatggcttcctgtgcacctgcctgcccggctttcggggcaca
aagtgcgaagaggacatcaacgagtgtgagagcaacccgtgtaagaacggggccaactgc
accgactgcgtcaacagctacacctgtacctgccctgccggctttagtggaatccactgt
gaaaataacacacctgactgcactgagagttcctgcttcaacggtggctcatgcatggac
ggcatcaacaccttcacatgcttatgtccaccgggcttcactgggagctactgccagcat
gatatcaatgagtgtgactccaaaccctgccagaacggcggcacctgccaggacagctac
ggcacctacaagtgtacttgcccacatgggtacactggactcaactgtcagaacttggtg
cgttggtgcgactcatcaccctgtaagaatgggggaacttgctggcagcagggcaccgcc
tacaaatgcgaatgtcagaccggctggacgggcctttattgtgacgtgccaagtgtctcc
tgtgaggtggcagccaaacagagaggggttgctgtcaccgatctgtgccgtaactcgggc
cagtgtctggatgctggaaacattcactactgccactgccaggttggatatactggaagt
tattgcgaggagcaggtggatgaatgcaccccgaacccctgccaaaatggagccacctgt
actgactttctaggcggatacacctgcaagtgcctaccaggctacgtggggaccaactgc
tctgatgagatcaatgaatgtttctcccagccgtgccagaacgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtccccgaggaacccaaggtgttcactgcgagatc
aacatcgacgactgcaacccgttcaccgacccggtcaccaaggagcccaagtgtttcaac
aaagggaagtgtgtggatcgagtcggaggttaccactgcatctgttctgcgggatacgtg
ggagagcgctgcgagggagacatcaacgagtgtctttccaacccctgtgacccgcggggc
acacacagctgcatccaactcaccaacaattaccgctgcgagtgtcgcaccggatacaca
ggtcagcgctgtgacacagtgtttgatggctgtaagggaaaaccgtgtcataatggaggg
acgtgtgctgttgccagtaacaccccacatggcttcatctgcaaatgtcctcctggtttt
gctggctccacatgtgaatatgacgcccagacttgtggcaacctccactgccgcaacgga
gggacctgcatctccggccaaaagagtcccaagtgtctgtgcacaccatcgttcactgga
cctgaatgccagtatcccaccgacagcccctgtaattctaacccctgctacaatggtggc
acatgtgaatacatctctgaggctccgttctaccactgtgtctgccccaccctcttcaac
ggcctccgatgtcacatcctggatcacgacttcaagggagggcctggcgatgaaatcacg
ccgccgtcggtggtggaggacgtctgtgagatcccgcagtgcgaggagcgtaagcacaac
aagtactgcgacgtgctctgcaacaaccatgcgtgcggctgggacaacggcgactgctcg
ctcaacttcaacgatccatggaagaactgcacagcctcactgcagtgttggcgctatttc
aatgatggaaagtgcgattcacagtgtgacaacgctggatgcctctacgatgggttcgac
tgccagaacctggaaggacagtgcaacccactgtatgaccagtactgcaaggaccactac
gctgatggccactgtgaccagggctgcaacaatgcagaatgtgagtgggacggtttggac
tgtgccaataacatgcctgagaaactcgccgtgggccagttggtcgtggtggtccacatc
acgcccgagctgctactcaacaattcgtttggcttcctgcgtgagcttagcagggtcctt
cgtaccaatgtgatattcaggaaaaaccttaagggcgagatgatggtgtatccttactac
gggaacgaacaggagctgaagaagtacaatgtgaagcgctcagtggacacgtggccagag
gttcctgtcaaggtgctgaatgtggtgaagaggagcctttatgatgtagcaggcgggagc
aagcgagtgaagagggagttggatcacctgcagatcaaaggttcagtcgtccacttggag
gtggacaaccgtcaatgcttccagcagtcctccgagtgtttccagagtaccaacgatgcc
gcagcctttcttggggctctggcctccagcggcaaactggacgttccctacaccattgaa
gccgtattcagcggtgtggaccccgagccaagccgacccctatacccaatttacctggtc
ctggccggcgtagggatactggccttcatcggagtggggatggtggctgcccgaaagcgc
cgccatgagcacgggcgcctctggctccccgagggcttcaagaccacagagactagcaag
aagaagagacgtgaacctgtcggagaggattctgtgggattaaagccactgaaaaacacc
tcagacatatcactgatggatgacacccagaatgattggggagaagatgagccttcggac
gctaaacgcttcaggcagtttgacgagcaggctatacttgaggcggacgaccagacagac
caccgacaatggacccagcagcacttggatgctgctgacctgcgcatcccctccatcgct
ccaacacccccccagggcgagattgaaaatgactgcatggatgtcaatgtccggggacca
gatggattcacgcccctgatgattgcgtcctgcagcgggggagggctagagacaggcaac
agcgaggaagaggaggatgcctctgccaacgtgatcaatgacttcatctaccagggtgct
aatcttcacaaccagactgaccggacaggtgaaaccgctcttcacctggctgctcgctat
gctcgttctgatgctgccaaacgcttgctggaggccagtgctgacgcaaacatccaggac
aacatgggcaggacgcctctgcatgctgctgtggccgctgatgcccagggcgtgtttcag
attctgataaggaaccgtgccacggacttggatgctcgcatgcatgatggcaccacaccc
ctgatcttagcagccaggctggcagtagagggcatggtggaggagctcattaactgtcat
gctgacgtcaatgcaatcgatgattttggtaaatcagccctacattgggccgcagcagta
aataatgtggaggctgctattgtgctactcaagaacggagccaacaaagacatgcaaaac
aacaaggaggaaacacctctattcttggctgccagggaaggaagctacgaaactgccaag
gtcttactggatcattttgccaacagagaaataactgaccacatggaccggctacccaga
gacattgcacaggagaggatgcatcatgatattgtgcgtctgatggatgagtacaatctg
gtacgaagtcctcccatgcatggagggtctctaagcaccaccttgtcacctcctctttgc
tcgcccaacggctacctgggcagcatgaagcagcctctgcctcagggtcaaggtcagggc
aaaaaagcacgtaagcccagcactaagggcattgggtgcaaggatggcaaagacatgaag
gtgaagaagaagaattcgcaggatgggaaacctggaaacctcctggacagctcagctgtt
ctgtctccagttgactcgttagagtccccccacggctatgtctctgatgtggcctcaccg
cccatgatgacctcaccctttcagccatcgccatctgtatctctcaatcatctgcagggc
atgtctgacccacacctggctgtaaaccacatggtgatgcctaacaagcaggagctggcc
cggatgcagtttgacccactgcctccccgtctcacccatctgcccgtgtctggctccggt
gggcagggtgccatgaacgggcagtgtgattggctctccaggatgcacagcaatatgagc
cagccgagtcagttcaacccgatgagaggagcacccggtggtcagggaggtttgcaccag
ggtggacagcacgggctgatgacctccctccacaatggccaccccaacaccagcctgtct
caaatgatgacctaccagggtatccagagcacccgactgggtccgcagccccacatcatg
cagcagcaggctcaacagatacagcagatgcagaacctccagcagctacaacagcagcag
cagcaacaacaacaacaaaccatccagctgcagcaccagaactcaaacacagccaacagc
cagaacttcatcagcggtgagctcggttccccggagctccagcagggcacaggcaactcc
agcatgcccattcacaccatcctgccacaggagacccagataatgacctcctccatcaac
cagtcaatgcccagcacccagttcctcactcctccctcccagcacagttattcagggccc
atggacaacaccccaaaccatcaggtccaggtccccgatcacccctttctgaccccttcc
ccgggctccccggatcagtggtcaagttcatctcctcattctaacatgtccgactggtca
gagggcatttcaagtccaccgactagcatgcagtctcaaattggacatatacctgaacag
ttcaaataa
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integrated database retrieval system
