Scomber japonicus (chub mackerel): 128367482
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Entry
128367482 CDS
T09718
Name
(RefSeq) glutamate decarboxylase 1 isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00250
Alanine, aspartate and glutamate metabolism
sjo00410
beta-Alanine metabolism
sjo00430
Taurine and hypotaurine metabolism
sjo00650
Butanoate metabolism
sjo01100
Metabolic pathways
Module
sjo_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128367482
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
128367482
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
128367482
00430 Taurine and hypotaurine metabolism
128367482
Enzymes [BR:
sjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
128367482
BRITE hierarchy
Motif
Pfam:
Pyridoxal_deC
SepSecS
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
128367482
NCBI-ProteinID:
XP_053183996
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All DBs
Position
11:complement(16220681..16230537)
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AA seq
591 aa
AA seq
DB search
MAASAPSSSGGEPDPNSTNLRPPGSSYDAWCGVAHGCTRKLGMKICGFLQKNNSLEERSR
IVSSLKERTAKNLLSCDNSGRDAHFRRTETDFSNLFARDLLPAKNGEEQTMQFLLEVVEI
LTNYIRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTG
HPRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEIAPVFVLMETLTLTKMREIIGWPDGE
GDGIFSPGGAISNMYSVMIARYKFFPEVKTKGMAAAPRLVLFTSEHSHYSIKKASAALGF
GTENLILLNTDERGRVIPADLEAKVIEAKKKGHVPMFVNATAGTTVYGAFDPINEIADIC
EKYNIWLHVDGAWGGGLLMSRKHRHKLNGVERANSVTWNPHKMMGVPLQCSAILVRERGL
LQGCNSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEQHIDKC
LDLSSYLYNKIKDREGFEMVFNGEPQHTNVCFWYLPASLRSLPDGEERRERLHKVAPKIK
AMMMESGTTMVGYQPQGDKVNFFRMVISNPAATRSDIDFLIEEIERLGNDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtctgcaccctcctcctctggcggagaaccggatcccaactcgacaaattta
cgaccaccgggctcaagctatgatgcatggtgtggagttgctcatgggtgtacaagaaaa
ttgggaatgaagatatgtggatttttgcagaagaacaacagtctggaggagaggagcagg
attgtgagttccctcaaggagcgcacagccaagaacctgctgtcctgtgacaacagtggc
agagatgcgcatttcagacgcacagaaaccgacttctccaatctgttcgccagagatctg
ttgcctgccaaaaatggagaggagcagactatgcagttcctgctggaggttgtggaaatc
ctcactaactacatccggaagacctttgaccggtccaccaaggtcctggacttccaccac
ccccaccaactgctggagggcatggagggtttcaacctggagctctctgaccagccagag
tctctggagcagatcctggtggactgcagggacaccctgaaatatggagtgaggacaggt
caccccaggttcttcaaccagctgtccactggattagatatcgttgggttggcaggagag
tggctcacatctacagccaacactaacatgttcacctatgagatcgcccctgtctttgta
ctcatggagacgctgacactgacaaagatgagagagataattggctggcccgatggagag
ggtgatggcatattttctccaggaggagcaatctccaacatgtacagtgtgatgattgcc
agatacaagttcttccctgaagtcaagaccaaaggcatggcagctgcacccagactggtc
ctcttcacctcagagcatagccactattccatcaagaaagccagtgcagctctgggcttt
ggaacagagaacctgatcctgttgaacacagatgagagagggagagtcattcctgctgat
ttggaagccaaagtaatagaagccaagaaaaaggggcatgtccccatgttcgtgaatgcc
accgctggtaccaccgtctacggagcctttgatcccatcaatgaaattgcagacatctgt
gaaaagtacaacatatggcttcatgtggacggtgcatggggcggaggtttgctgatgtca
aggaaacacaggcataagctgaatggagttgagagggccaactcagtcacctggaaccct
cataagatgatgggagtgccgctgcagtgctctgccattctggtcagagagaggggatta
ttacaaggctgcaactccatgtgcgctggttacctcttccagccagacaagcagtacgac
gtcacatacgacaccggagataaggccattcagtgtgggcgacacgttgatatcttcaag
ttctggctcatgtggaaggcaaagggaacagtaggatttgaacagcatatcgacaagtgc
ctggatctttcatcgtacctctacaataaaataaaggacagagagggctttgagatggtg
tttaacggagagccgcagcacaccaatgtgtgtttctggtaccttcctgcgagcctgcgc
agcttgcctgatggtgaggagaggcgtgagaggttgcacaaggttgccccaaagatcaag
gccatgatgatggagtctgggactacaatggtgggttaccagccacaaggagacaaggtc
aacttcttccgcatggtcatctccaaccctgctgctaccaggtcagacatcgacttcttg
atcgaggagatcgagcgactggggaatgacttgtaa
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