Scomber japonicus (chub mackerel): 128371873
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Entry
128371873 CDS
T09718
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00780
Biotin metabolism
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
128371873 (hlcs)
Enzymes [BR:
sjo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
128371873 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
128371873 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
128371873 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
128371873 (hlcs)
BRITE hierarchy
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
128371873
NCBI-ProteinID:
XP_053188229
LinkDB
All DBs
Position
13:complement(30651204..30673667)
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AA seq
927 aa
AA seq
DB search
MLITLCYVYMWVRFHKCYSVLIRNSLSRLNSSSRSSLSFSRLCSASTPATTPQTGHHRSR
QQHRPPPSEDTVFLQLGDKSVHVTEPQACDDLSKWTVLLGSSMVCGPGIENISFIIEATG
HRVGYPSSHTSNKKVLKWSDCCLPLACSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDN
GLMPSKIIPVLLQESILCELLEKQRPPSPTIVTSAQLCSPMAEKPLACRLSADHQLLLSK
KDSLFLIPEAKRRLEERRGSEPLCRTQDLGSVGDSKDHSLGNHHHMEGHGHNLHLSSCHE
CLELEKSTILSVKYASAENITDLPDDNSVGLDSGDEILDEFQHDANGFFDQSNGFQCNCK
PPNILVYTGGCQERFQAVHQVLSECINMENYIIYHLLPQQVLSDPWLDNTKLLVLAEGQA
LTPQLQTCFLNFLGQGGRVLGIASTLCPAGLSMEVRERQRGQICRLSFTREDSTELDLSV
LASGKVYVRDIQGGGEVELWGELKGDGPHQRDMVIVRVTHGEDGGEAVVCQVHLEIAPDS
QNLSLEGFDELKASNALRYEVLTEILTSLGLSCEINQSPEPSPVHLLATSQEAKTTFLNW
LQTLADENGLLVLSKTFLRVVSYCELQNGPLLPESSLVLVTDSEESQRWELFNMETYSSN
LKTRVLGRTLLYADVVTSTMDLLEGLTLHLPKDVGLIAIAARQSKGRGRGRNAWLSPLGC
AMFTLSVEVDLSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDLDLRVKWPNDIYYSKLMK
LGGVLVTSTVIGSTFHLLIGCGFNVTNSNPTLCINDLIRQYNIQHNCNLQPLSCAQLIAR
TVSCLEALISSFQQGGPESILPTYYKRWLHSGTHVRLWSEDGPEAEVVGLDPNGFLQVHS
KEQGLVSMEPDGNSFDMMKNLVVVKQH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacattgtgctacgtctacatgtgggtacgcttccataagtgctactctgtg
ctgatccggaacagtctgtccagactgaacagtagcagccgcagcagtcttagtttcagc
cgcctctgctcggcttcaacgccagctacaacaccgcagactggacaccacaggagcagg
cagcagcacagaccgccgccatccgaggacaccgtcttcctccagctgggagacaagtcc
gtccatgtcacggagcctcaggcatgtgatgacctcagcaaatggactgtgttattgggg
tcctctatggtttgtggtccaggaatagagaatatttcattcatcatagaagctacagga
cacagagtgggctacccatcttctcacacatcaaacaagaaagtgctgaagtggtctgac
tgctgtcttcctctggcatgtagtcctgggcagccattcagggcagtggctcaggccagt
gtggataacttcagtcggctgggtgtggcttttatagaggatcgccttcagctggacaat
ggacttatgccttcaaagataatccctgtcctgctccaagaatccattctgtgtgagctg
ttggagaagcagcgtccaccgagcccaacaattgtgacatcagcacagctttgcagcccc
atggctgaaaagcctttggcttgtcgcctgtcagctgaccatcagctccttctgtccaag
aaagacagcctttttctcatcccagaggcaaagcggaggttagaagagcgacgagggtca
gagccactctgtaggacccaggatctgggatctgttggtgactcaaaagaccattccttg
gggaatcatcaccatatggagggccatggacataacctccatctgtctagctgccatgaa
tgtttggagctggagaaaagcaccatcctttctgtcaaatatgcctcagctgagaacatt
acagaccttcctgatgataactcagtagggctggacagtggggatgagattctggatgaa
tttcagcatgatgccaatggtttttttgatcaaagcaatggatttcaatgtaattgcaaa
ccgccaaatattctggtgtacacgggtggttgccaggagcgttttcaggcagttcatcag
gttttatcggagtgtataaacatggaaaactacataatataccaccttctaccacagcag
gttctgagtgatccttggctggacaacaccaagctcttggtactggcagaggggcaagcc
ctgacaccccaacttcagacctgctttctcaacttccttggccagggtggcagggttctg
gggatagcctccaccctgtgcccagcaggcctctctatggaagtcagggagagacaacgt
gggcagatctgtaggctcagctttactagggaagacagcacagagctggatttaagcgtg
ttggcaagtgggaaggtctatgtcagagatattcaaggaggaggagaggttgagctctgg
ggtgagttgaaaggggacggtcctcatcagagggatatggttatcgtcagggtaacccat
ggagaggatggcggagaagcagttgtctgtcaggtccacctggaaattgctcctgactcc
cagaatttgtcattagaaggttttgatgaattaaaggccagcaatgcactgcgttatgaa
gtcttgacagagatccttacctctcttggcctcagttgtgaaataaaccagagtccagaa
ccaagtccagtccacctgctggccacttctcaggaggctaagaccaccttcctgaactgg
ctgcagacacttgcagatgaaaatggcctcctcgtgttgtccaaaaccttcctcagggtg
gtgtcctattgtgagctccagaatggtcctttgctgcctgaaagctctctagtcctggtc
actgactctgaagaatcccaaaggtgggagctgttcaatatggagacctacagcagtaac
ttgaagaccagagtactggggcgcactttgctgtatgctgacgttgttacatctaccatg
gacctgttggaaggacttactctgcacttaccaaaggatgtgggtttaatagctatagct
gctcgacaaagcaagggcagaggtcggggtaggaatgcctggctcagtcccttgggttgt
gccatgtttacgctgagtgtcgaggtggacctgagctccaggctcggacagaggataccc
ttcctgcaacatctggctgctctggctgtggttgaggctgttcggacacttcctggatac
caggacctagacctgagggtaaagtggcccaatgacatctactacagtaagctgatgaag
ctcgggggagtgctggtgacttccactgtaataggatcgacctttcatctgctcataggt
tgtgggttcaatgtgactaacagcaacccaacattgtgcatcaatgacctaatccggcag
tacaacatacaacacaactgcaacctgcaaccactaagctgtgcccagctcattgctcgg
acagttagttgtctggaggccctcatcagcagcttccaacaaggaggccctgaatccatc
ctgcccacctactacaagagatggcttcacagtgggactcatgtgcgtctctggagtgag
gatggaccagaggctgaagtggtgggactggaccccaatggcttcctccaagtacacagc
aaggagcagggtttggtttcgatggagcctgacggaaactcctttgacatgatgaagaac
ctggttgtcgtcaagcaacattag
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