Scomber japonicus (chub mackerel): 128374832
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Entry
128374832 CDS
T09718
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128374832
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128374832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128374832
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Glutamate (ionotropic)
128374832
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
128374832
NCBI-ProteinID:
XP_053191028
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Position
16:complement(10527286..10596996)
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AA seq
1337 aa
AA seq
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MVSLSGLWTYCLAPGRPHLLFLYARLLLLLLLLTVFTSPEPCLPHPQPCHILARIGHTVR
LGALLPTRQPARIQNALNRALASLRHQSGGADSSTTPSQALPLLPYNLSLEMVARSPAGG
DPESLSRSACQDLVVRGVSAMLAFPRSREELIQVEFLSSFLEIPFISILEDTEPLVTKNQ
FHLQMSARVPPSTLGSLLLAVLQGGDGERNRGNWGESSWGGAAVICPGWEEGGDGLLSHL
QKHSGSAWHLWDIINLTHISGARDRRGEASEERREDQKEEEALKILSTRFLRSPSPLSSV
LLLGSDPECLSSVLRAAQRLAPTLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPI
SFYIRDALQLIGRAVTAATMVRPDLALIQNTVNCYDKPNRHELPSSGQYLARFLANTSFN
GATGLIQVDAGFSRVLSSQLFHVWSLKRGALGQPAWVTVGQWSRGRLELEGGILGLVGGF
GSSQGQGLGAGVRGGDGQGDFNAGGRWRPGLSVEGNRLRVVTLVEHPFVFTREVDEDGLC
PAGQLCLDPRTNRSDIIQGLFNQLHNPNATTTDGDGNDLPEDLRKCCYGYCIDLLEKLAE
DMGFTFDLYIVGDGKYGAMSGTGRWTGLVGDLLGGTADMAVTSFSINSARSRVIDFTSPF
YSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHGR
NRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVM
VGEKTFEQVSGIHDDKLHHPSLGFRFGTVRESSAEEYLKKSFPEMHDYMRRFNQPTTPDG
VHMLKTDPPTLDAFIMDKALLDFEVSIDAECKLLTVGKPFAIEGYGIGLPQGSPLTRNVS
EFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALLT
LAGEHTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHTTYEDVGKELTGLDQNPSSCISEN
CTLHRKQHQPPPPSPPTSLPASSTAGDTVTSSSPSHEPKEKRVHFDLETLHSYRLRTHTA
SVRGRPGMVGRPGLGLGGLGLGNFGSFTSPPQISLHANGGPASALASTGLVLSPLGSRAA
QTSLWEGELQELQGKIEIFRTQLREALARRAEIQSSLERERSGLVRRDTSLERERDRQRI
QTINTDRSSSTQSKLPERDRTSQLQTLNNQQTGRANQSGGPGTLEHGRSSQLNTVNSLDR
GRDHQLRSVNTLTEERTVHSRTSTSLERSRVTQPGAGNISVQSRNTSSLDRQKANISRTL
NTLERTKANQSSVSSGT
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctctctggactctggacctactgcctcgcccccgggagacctcatctcctt
ttcctctatgccagactgctcctgctgcttctcttattaaccgtcttcacttcccccgag
ccctgcttaccgcacccccagccgtgccacatcctcgcccggataggtcataccgtacgc
ctcggtgcgctcttgccgacccgccagccggcacggatacaaaacgcgctcaaccgcgcc
ctggctagcctccggcaccagagcggaggggcagattcctccacgacaccctctcaggca
ctacccctgctgccctacaatctgagcctggagatggtggctcgatcgcccgcgggtggg
gacccggaatcgctgtcccgcagcgcctgtcaagacctggtggtcaggggggtgtccgct
atgctcgccttcccccgctccagggaggagctgatccaggtggagttcctctcctctttc
ctggagatccccttcatctccatcctggaggacacagaacctcttgtgaccaagaatcag
ttccacctgcagatgtcagcccgtgtgcctccatcaactctgggcagcctgctgctggca
gtcctgcaggggggagatggagagagaaacagaggaaactggggagagagcagctgggga
ggtgcagctgtgatttgccctgggtgggaagagggcggtgatgggttgctctctcacctg
caaaagcacagtggttctgcctggcatttgtgggatatcatcaacctgactcacatctca
ggggcgagggatagaagaggggaggccagcgaagagaggcgagaggatcagaaggaagaa
gaggctttgaagatcctttccactcgttttctgcgctccccctctccactttcctctgtt
ctcctcctgggctctgaccccgagtgtctgtcctctgtcctgcgtgctgctcaacgcctg
gctccaacactaccagcactacaatggatcatgggttaccccctgtcgccagactcgcta
cacaccttagggggtccccttggcctgttagcctacggcgaggtcggccgcaaaccaatc
agcttctacatccgagatgctttgcagttgattggacgagcagtcactgcagcgaccatg
gtgaggccggacttggcactgatccagaacacagttaattgttacgacaaaccaaaccga
cacgagctgccctcttcaggacaatacctggccaggttccttgccaacacttccttcaat
ggagctacaggcctgatccaagtggatgctggattctcccgagtcctctcttcccagctg
tttcatgtctggagccttaaaaggggtgctctgggccagccagcctgggttaccgtaggc
cagtggtcccgaggcaggctggagttagagggcgggatcctggggctggtgggaggattc
gggagcagccagggacaaggtcttggagctggtgtgagaggaggagatggccagggggat
tttaatgctggaggacgttggaggccaggactttctgttgagggaaaccgcctgagggtg
gtgactctggtggagcacccgtttgtcttcacgcgcgaggtagatgaggatggattatgt
ccagctggtcagctctgtctggaccccagaaccaaccgctcagacataatccaaggcctc
ttcaaccagctgcacaacccaaacgctacaactacagacggggacggcaatgacctacca
gaggacctgaggaagtgctgctatgggtattgcatcgacttgttggaaaaactagctgaa
gatatgggcttcacctttgacctctatatcgtgggagacgggaagtatggggcaatgagt
gggacaggacgctggacggggctggtcggggacctgctgggtggaactgctgacatggct
gtcacctctttctccatcaactctgccaggagcagagtcatcgatttcacctcgcccttt
tattccaccagcctgggcattctggttcgtagccgtgacactgcagccccaatcggagcc
ttcatgtggcctctccactggtccatgtgggtggggatttttgtcacgctgcacctcacc
gcactcttcctaaccttgtacgagtggaacagcccctttggcatgacacctcatggcagg
aataggctgcgtgtattctcctactcctccgccctcaacctctgctacgccatactcttt
ggacgcactgtcgccaccaagactcctaaatgctggacagggcgtttcctgatgaacctc
tgggccatcttctgcttactggtgctatccagctacaccgccaatctagcagcagtcatg
gtcggggagaagaccttcgagcaggtctcaggaattcatgacgacaagctacaccatccc
tccctgggctttcgttttgggacagtgagggagagcagtgctgaggaatacttgaagaag
agctttccagagatgcacgactacatgagacgcttcaatcagcccaccacccctgatggc
gtacatatgttaaagacagatcctcctacattagatgcgtttatcatggacaaagccctg
ttggactttgaggtctctatcgacgcagagtgcaagctgctcactgtggggaagccattt
gccattgaaggctacggtatcggcctaccccagggctctcctttaacccgtaatgtgtca
gagtttgtgagtcgctacaagtcagacggcttcatggacatgctacatgacaaatggtat
aaggttgtgccctgcgggaagcgagtctttgcagtgactgagactctacagatggggatc
cagcatttttcaggcctttttgtgctgctgtgtatgggggtgggtggagccttactgacc
ttggcaggtgaacacaccttctatcacctggtcatccctcgccttcggcgcacacacaca
ttgcaatactggctacacacgagccagaaaatacacagagctctccacaccacatacgag
gacgtagggaaggagctgactggcctcgatcaaaacccctcctcttgtatctcagagaac
tgcaccctacacaggaaacagcatcagcctcctcccccatctcctcccacatccctccct
gcttcctctacagctggggacactgtaacctcctcctcaccatcccatgagcccaaggag
aaacgtgtacactttgacctggaaaccctccacagctaccgcctgcgcacacacaccgcc
tcagtgcgcggcaggcccgggatggttggccgtccagggcttggtctcggaggattaggg
ttgggcaactttgggagttttacctcccctccacaaattagcctccatgccaacgggggc
cctgcatcggcattggcttctacaggcttggtgctctctcccctggggagcagggctgct
cagaccagcctgtgggagggggagctccaggagctgcaagggaagattgagatattccgc
acacagctgagagaggctctggcgaggagagctgagatccaaagcagcctggagagagag
aggagtggacttgtgcgcagggataccagtctggaaagagaaagggacagacagaggata
caaactattaacactgacagaagtagctcgactcagtcaaaactccctgagagagacagg
accagccaactgcaaaccctgaataatcaacagacagggagggctaaccaatcagggggt
cctgggactctagagcatgggaggagcagccaattaaacacagttaacagtttggacaga
gggagagaccaccaactacgatctgttaatactctaacagaagaaaggactgtccattca
cgcacctccaccagtttggagcggagtcgtgtcacccagccaggtgctggaaacataagc
gtccagtcacggaacacttctagcctggacagacaaaaggctaacatttcacgcactctg
aacactttggagaggacaaaagccaaccaatcaagtgtaagcagtgggacttga
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