KEGG   Scomber japonicus (chub mackerel): 128374872
Entry
128374872         CDS       T09718                                 
Symbol
xpo1a
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03008  Ribosome biogenesis in eukaryotes
sjo03013  Nucleocytoplasmic transport
sjo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128374872 (xpo1a)
   03008 Ribosome biogenesis in eukaryotes
    128374872 (xpo1a)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    128374872 (xpo1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128374872 (xpo1a)
   03009 Ribosome biogenesis [BR:sjo03009]
    128374872 (xpo1a)
   03016 Transfer RNA biogenesis [BR:sjo03016]
    128374872 (xpo1a)
   03036 Chromosome and associated proteins [BR:sjo03036]
    128374872 (xpo1a)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     128374872 (xpo1a)
Ribosome biogenesis [BR:sjo03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    128374872 (xpo1a)
  Pre-60S particles
    128374872 (xpo1a)
Transfer RNA biogenesis [BR:sjo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    128374872 (xpo1a)
Chromosome and associated proteins [BR:sjo03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     128374872 (xpo1a)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 BspA_v Gluconate_2-dh3
Other DBs
NCBI-GeneID: 128374872
NCBI-ProteinID: XP_053191082
LinkDB
Position
2:complement(4864700..4897376)
AA seq 1066 aa
MPAEMTMLADHPARQLLDFSQKLDINLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRVAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGVHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
SPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETALRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccagcagaaatgacgatgttggccgatcacccagctcgacaactgctggacttcagt
cagaaacttgacatcaaccttttggacaatgtggtgaactccatgtaccacgacatcggc
tcccagcaacgagtggcccaggaagtgctgaccaacctgaaggaccatccggacgcctgg
acgagggtcgacaccatcctggagttctcccagaacatgaaaactaaatattacgctctg
cagattctggagacagtcatcaaaactcgctggaagattctccccagaaatcagtgtgaa
ggaatcaaaaagtatgttgtcgggttgattattaagacgtcttctgatcctgccaacatg
gagaaggaaggcgtctacatttccaaactcaacatgatcctcgttcagatcttgaagcag
gagtggcccaaacactggcccaccttcatcagcgacatcgtgggagcgagtcggaccagc
gagtctctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaagtgttcgac
ttctccagcggacagatgacgcaagtgaaggccaaacacctcaaagacagcatgtgtaac
gagttctcccaaatattccagctgtgccagttcgtcatggaaaactcccagaatgcacct
ctggttcacgccactctggagactctgctgcgcttcctgaactggattcctctcggttac
atcttcgagaccaaactcatcagcacgctcgtctacaagttcttgaacgtgccgatgttt
cgtaacgtgactctgaaatgtttgacggagatcgccggcgtcagcgtcaatcagtacgag
gagcagttcgtcaacctgtttactctcaccatgtgccagctcaaacagatgcttcctttg
aacaccaacatcagagtagcgtacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcttgttcctctgcacgttcctcaaagaacacggacagctgatcgagaagaga
cccaacctgagggagactctgatggaggcgctccactacatgctgctggtgtcggaggtc
gaggagacagagatctttaagatctgtctggagtactggaaccatctggcagcagagctc
tacagagagagtccgttctccacctccagcacgccgctgctgtctgacgtaccgccacgc
agacacctctacctgcccgtcctgtcgcaggtgcgtctgctgatggtgagccgcatggcc
aaaccggaggaggttctagtggtggagaacgatcagggcgaagtcgtcagagagttcatg
aaagacacggacgccatcaacctttacaagaacatgagagagactctggtctatctgaca
catctggattacgcggacactgaacgcatcatgacggagaagcttcacaaccaggtgaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggctccatcagc
ggagcgatgcacgaggaggacgagaaacgcttcctggtcaccgtcatcaaggatcttctg
ggtctgtgtgagcagaaacgagggaaagacaacaaggccatcatcgcctctaacatcatg
tacatcgtgggtcagtatcctcgcttcctcagagctcactggaagttcctgaagaccgtc
gtcaacaagctctttgagttcatgcacgagactcacgacggcgttcaggacatggcctgc
gacacattcatcaagatcgctcagaagtgtcgtcgtcacttcgtccaggttcaggtcggc
gaggtgatgccgttcatcgacgagatcctcaacaacatcaacaccatcatctgtgacctg
cagccgcagcaggttcacacgttctacgaggccgtcggctacatgatcggagctcagacc
gatcaggcggttcaagaacttctgatcgagaaatacatgctgctgccaaaccaggtctgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgctgagacggtg
cgtcagctgggcagcatcctgaaaaccaacgtccgagcgtgtaaagccgtgggtcatccc
ttcgtcgtccagctgggtcggatctacctcgacatgctgaacgtctacaagtgtctgagt
gagaacatctcgtcggccgttcagacaaacggagaaatggtgacgaagcagccgctgatc
aggagtatgaggacggtgaagagagaaacgctgaagctgatctcaggttgggtcagtcgc
tccaacgatcctcagatggtcggggagaacttcgtgccccccctgctggaggccgtgctc
atcgactaccagaggaacgtcccggccgccagggagcccgaagtcctcagcaccatggca
accatcgtcaacaagctgggcgtccacatcaccggggagatccccaagatcttcgacgcc
gtgttcgagtgcactctgaacatgatcaacaaggacttcgaggagttccccgaacacagg
actcatttcttctacctcctccaagccgccacgtctcagtgcttcccggccttcctgtcc
atcgctcccgctcagttcaagctcatcctggactccatcatctgggccttcaagcacacc
atgaggaacgtcgccgacacaggtcttcagatcctctacacgctcctgcagaacgtttcg
ggggaggaggcggcggcgcagagtttctaccagacgtacttctgtgacgttctgcagcac
atcttctcggtcgtcaccgacacttctcacaccgcaggtctgacgatgcacgcgaccatc
ctggcgtacatgttcaacctggtggaggaagggaaggttagcgtagcgcttagcgccgct
agccccgctaacaaccaggctcacgtccaggagtacatcgctaacctgctgaagaccgcc
ttcccacacctgcaggacgctcaggtgaaagtgttcgtgacgggtctgttcagcttgaat
caggacattcccgcctttaaggaacatctgagggacttcctggtgcagatcaaggagttt
gcgggtgaagacacgacggacttgttcctggaggagcgagagacggctctgcgtcaggct
caggaggagaaacacaagctgcagatgtctgttcctggaatcctgaaccctcacgagctg
ccggaggagatgtgtgactga

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