Scomber japonicus (chub mackerel): 128376960
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Entry
128376960 CDS
T09718
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128376960 (gpcpd1)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
128376960 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
PI-PLC-X
KGK
Motif
Other DBs
NCBI-GeneID:
128376960
NCBI-ProteinID:
XP_053192796
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All DBs
Position
17:complement(12997310..13016731)
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AA seq
674 aa
AA seq
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METTEVTLAIRGETSPGEVIAVTGGCETLGSWSPQKAVILHPDGNDGSTWTATITIPQGV
VSKYRYFKGFFLESKSADGPRQVIVKMWETHHQPRTMSPTASHLNIDDGRFGIHNGVNCV
DSGWLTCQTEVRLRLHYSRTSPVSITKKKFKKSRFRIKLTLEGIEEEEDEEENELSPSSL
HKINSTLEISMISANGYKSRHSQPECGYALEPTQWTEYSIHTMDPDNLELTFEFFEEDLG
EHVVHGDTHPGQVGTACLLSSSFLENGKDIGVATIPIMGRNSRQTIGKVRVDYLVIRPIQ
GLQFDMSSSFTKYWKKRSTLDVGHRGAGSTHAAKHHRIRENTIASFKSAAKHGAAYVEFD
VHLSKDAVPIVYHDLTCCISTKKKNDNTSLELIEVPVKDLTFDQLQLLKLAHATAIKGND
HKDLLDDEEEIDEHQPFPSLSQIFQAIPEHVGFNIELKWICQMKDGSWDGNLPSYFNMNT
YLDTILSCVLQKGGKRRIVFSCFDPDICTMVRQKQNKYPILFLTQGISERYPELMDIRCQ
TTQIAMSFAQSENILGISAHTEELLKHLSYIGEAQAKGLVVFSWGEDNNDHQNRRKLREQ
GIDGLIYDSICDEKGEQPNIFQVEEQHSLQEVITEETLKSSTCSCYSIPCTVAPCNDSKT
RTGSAESDSGLSSS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactgaggtgactttggctatcagaggagaaacatccccaggtgaggtgatt
gcagttactggtggctgtgaaaccttggggagctggagtcctcagaaagctgtgatctta
catcctgatggaaatgatggaagtacgtggacagcaaccatcaccatacctcagggagtt
gtttccaagtaccgctatttcaagggcttctttctggagtcaaagagtgcagatggtccc
cgtcaagtgatagtcaaaatgtgggagacccatcatcaaccccgcacgatgagccccaca
gcatcacacctgaatattgatgatggacgatttggaattcacaatggggtgaattgtgtt
gactctgggtggctgacgtgccaaacagaggttcgcctgcgtctgcattattctaggacg
tctccggtgtccatcactaagaagaaattcaagaagtctcgcttcaggatcaaactaaca
ttagagggcattgaggaggaggaagacgaggaggaaaatgagctcagtccttcatcattg
cacaagataaacagcactctggagatcagtatgatcagtgccaatggctataagtctcgc
cactcgcagcctgaatgcgggtatgctctggagcccacacagtggactgagtacagtatc
cacacaatggacccagacaacctagagctcaccttcgagttctttgaggaggatctaggt
gagcatgtagtccacggggacactcatcctggccaagtgggcacagcttgcctcctctcc
tcctcttttctggagaacggcaaggacatcggagtagccacaattcccataatgggtcga
aattccaggcagaccatcgggaaagtcagagtggactacctggtgatccggcccatccag
gggctgcaatttgacatgagctcttcgttcaccaagtactggaagaaaagaagcaccctc
gatgtgggccacagaggagctggcagtacacatgcagccaagcaccacagaatcagggag
aacactatagcctctttcaaaagtgctgctaaacatggtgccgcctacgtggagtttgat
gttcacctctccaaagatgctgttcccattgtttaccatgatctgacatgctgcatatcc
accaaaaagaaaaatgacaatacttctttggaacttattgaggtgccagtcaaagacttg
acctttgatcagctgcagcttctaaagctggctcacgccactgcgataaaaggaaatgat
cacaaagatctgctggacgatgaagaagaaattgacgagcatcagccattcccctcgctc
tcacagatcttccaagcgattcctgagcatgtgggcttcaacatcgagctcaagtggatt
tgccagatgaaggatggatcatgggacggaaacctgccatcctacttcaacatgaatacc
tacctcgacaccatcctgtcctgcgttctgcagaaaggcggcaaaagacgcattgtcttc
tcctgtttcgacccggatatctgcaccatggtgcgtcaaaagcagaacaagtatcccatc
ctcttcctgacccagggaatttcagaaaggtatcctgagctaatggacatccgctgccag
acaactcagatcgccatgagctttgcccagagcgagaacattctgggaatcagtgcccac
actgaggagctgctaaagcacctaagctacattggagaggcccaggctaaaggtctggtg
gtgttcagctggggagaggacaacaacgaccatcagaacagaaggaagctgagggagcaa
ggaattgatgggctcatctatgatagtatctgtgatgaaaaaggagaacagccaaacatc
ttccaggtagaggagcaacactccctgcaggaggtcattacagaggagaccctaaagagc
tccacctgttcctgctactccattccctgcaccgtggctccttgcaacgactccaagacc
cgtactggcagcgctgagtccgattctggcctcagctcctcttaa
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