Scomber japonicus (chub mackerel): 128378273
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Entry
128378273 CDS
T09718
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128378273 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128378273 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128378273 (grin2aa)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Glutamate (ionotropic)
128378273 (grin2aa)
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
128378273
NCBI-ProteinID:
XP_053193706
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All DBs
Position
18:complement(12193994..12325628)
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AA seq
1427 aa
AA seq
DB search
MCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFF
QFGASIQQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIIT
LDAVEEDSRSQIMLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNP
EITPEEFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLDEYGDIPEAKTSCYGQME
KTTKLPPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKEREWEKMGKLDNRSLT
LKYPVWPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNT
TEAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKK
AVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVM
LLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKG
TTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGT
VPNGSTERNIRKNYPAMHQYMVKYHQTGVVDALVSLKTGKLDAFIYDAAVLNYMAGRDEG
CKLVTIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEK
NEVMSSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGTPGLLFSIS
RGIWSCIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSA
GPMIMDMMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLT
LNDANPNTVEVAVSADAVQTNAKPPRTLWKKSVDTLRSAPPGPPPMPDMLMPDPRLSMKT
QRYLPEDAAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRPLTSKYPRDCSEVELSYLK
TKQVSREKIYTIDSDRELSLHSDPIHYRESRGLAADDLDFPEIYSDHSDNFRKCEQPIIH
LNSSPLHHTDSDLLPDPSYSKHYNLKDKNLSPHESIDRYKQTHCRSCLSKVTAGYPQGSQ
QYPPAVSASAAASATRSPYNRCEACLHSANLYDISEDQLLADPLVSPTLHHQQQQQQQPD
EMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRFLDS
TSDSHYANLFGMRPYSGKLFGTGSKSMLFNHNLEESKRSKSLYPAHGSDNPFLSHSLRDD
TSSRLVHGRSSSDIYKQLAVASPAAVLGAAPIKTRNDANNLRSSVKSTTSYCSRDGRIAN
DMYNKEHVMPYSANKTTAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacctgatgtctgggaccaagatccacggtgtagtgttcggagatggcaccgac
caggaggccattgcccagattttggattttatttcctcgcagacgctcatacccattctg
ggcatccatggagggtcgtccatgattatggctgataaggatgtgaagtcaacattcttc
caatttggtgcctccatccagcaagaggctctactgatgctgaacattatggaggaatat
gactggcacatcttctccattgtgacatcaaagttcccaggctaccaggagttcatcaac
atcctaaaaactaccgtggacaacagttttgtgggctgggacctacagaatatcatcact
ctggatgcagtggaggaagacagccggtctcagatcatgctgaagaaagtccagtctcca
gtggtcctgctctactgctcgaaggacgaagccgtctacatcctggaagaggctcgctct
ctgggcctcaccggattcggatacatctggattgtaccatccctgaccaccggcaacccg
gaaataacacctgaagagtttccatcgggtatgatttcagtgtcatatgacgactgggac
tacccgttggaggcacgggttcgggatggtctggggatcataacgtcagcagctgcagcc
atgttggatgagtatggcgacatccctgaagccaagacgtcttgttatggccagatggag
aagacgaccaagctgccacccagtgcactgcataaatacatgatgaatgtgacatgggat
ggcagagacttgtctttcacagaagacggctaccaggaaaatccaaagctggtggtcatt
gttctcaacaaggagagagagtgggagaagatgggcaaactggacaaccgcagcctgaca
ctgaaatatccagtgtggccgcgcttcaactccttcggtgatgctgagcttgacgacaac
cacctgtccattgtcactttggaggagaaacctttcgtcattgtggaggatgtagagagg
ctcaccggaacttgcatgaggaactctgtaccctgcaggaagcatatcaaagacaataca
acagaggctggtgggacatacattaagaagtgctgtaaaggcttctgcattgatattctc
aagaagattgccaaatatgtcaagttcacctatgacctgtacctggtgaccaatggaaaa
catggaaagaagatcaacaatgtctggaatgggatggtgggagaggtggtctataagaaa
gccgtcatggccgtcggatctctgacgatcaatgaggagcgttctgaggtcatcgatttc
tccgtcccgttcgtggaaaccgggatcagcgtcatggtctcccgtagtaacggaaccgtg
tccccgtcagcctttctagagccattcagtgcatcagtgtgggtgatgatgtttgtaatg
ctcctactggtgactgcaatggctgttttcatgtttgagtacatcagtcctcttggcttc
aacagaaacctggcacaggggaaagaccctcatggcccctcctttacaatgggcaaggct
gtgtggctgctatggggtctggtcttcaacaactctgtgccagtgcaaaacccgaaggga
accaccagtaagttcatagtgtctgtgtgggccttctttgctgtcatcttcctggcttcc
tacactgccaacctggctgccttcatgatccaagaggagtttgtcgaccaagtcactggg
ctttctgacaacaagtttcagaacccgtatgcatactcacctccgttccgctttgggact
gttccaaacggatccactgagaggaacatcaggaagaactaccctgccatgcaccagtac
atggtgaaataccatcaaactggagtcgtggatgcacttgtcagcctcaaaactggcaaa
ctggatgccttcatctatgatgctgcagtgttgaactacatggctggcagagacgaggga
tgtaagctggtgaccattggcagcgggtacatttttgctaccactggttacggcattgct
ctacagaaaggctcctactggaaacgacaggtggatctggctattctagccatcatcgga
gatggtgaaatggaggaactagaagcacagtggctgacaggaatttgccataatgagaag
aatgaggtgatgtccagtcagctggatgtggacaacatggcgggggtcttctacatgctt
gccacggccatggggctctctcttatcacctttgtctctgagcatctcttttactggagg
ctcagatactgcttcaccggggtctgctctggcacgccgggtcttcttttctccatcagt
cggggaatctggagttgcatccatggagtccacattgacatgaagaaaaagacagatctg
gactttagccctcaggacaaaatgcttaagctcattaagtcagccaaacagatgacaaac
atgtctaacctgagtggctcccgcatgaactcacccaaacgtgagtttatgcattcagct
ggccccatgatcatggacatgatggcagagaagggcaacttcatctatgctgacaaccga
agctatgctcccaaagatatgatctatggggacacgggtgacctgcagtcttatcttgct
aaccgccacaaagaccaccttaacaactacattttccagggaggccaacatcctctgacc
ctaaatgatgctaatcccaacaccgtagaagtggcagtaagtgctgatgcagtccaaacc
aacgccaagccgccccggaccctgtggaagaagtctgtggatacgcttcgttcagcacca
cctggacctccccctatgcctgacatgttgatgcctgacccacgactgtcgatgaagacg
cagcgctacctccctgaggacgcagcccactctgacatctccgactgctccagcagggca
gcctcctacaaagacccagaaaacaacaagcacctgaagcccaaggacaacttaaaaaaa
agacccttgacgtcaaaataccctagggactgcagtgaggtggagctgtcctacttaaag
actaagcaggtcagcagagagaaaatttacaccattgactcagaccgagagctgagcctg
cactcagaccccattcactaccgtgagagtcgaggacttgctgctgacgatttggatttc
ccagagatctactccgaccacagtgacaactttaggaagtgtgagcagccaatcattcat
ctgaactcctcacccttgcatcacacagattcagatcttctaccagacccatcttactct
aaacactataacctgaaagacaaaaacctttctccacatgaatccattgatcgctataaa
cagacacactgccgttcctgcttgtctaaagtgactgctggctacccacaaggtagccag
cagtacccccctgctgtatctgcctctgctgcagcttctgctacacgttcaccttataac
cggtgtgaagcatgcctccactcagccaacttgtatgacattagtgaggaccagcttctt
gcagaccccttggtcagtcccacactgcaccaccaacagcagcagcagcagcaaccagat
gaaatgtttggcctctattggccacagacagatgggccgcatgtccagaagagaaatcga
ttgaggctgagtcgtcagcactcctttgacaacatcatgttggaaaagcctaaggatgta
gacctgggccgaccagcacgcagtgtcagcctcaaggagaaggatcgcttcctggactcc
acatctgactcgcactatgcgaacctctttggcatgcgtccatactccggcaaactgttt
ggcactgggtccaaatcaatgctgtttaaccacaacctggaggagagcaaaaggagcaag
tccctgtacccggcccatggctcggacaaccctttcctcagtcactcgttgagggatgac
accagcagcagactggtccatgggcgtagctcctctgatatttacaaacagctggcggtg
gcctcgccagcagcggtccttggagcggcccccatcaaaacacgtaacgatgcgaacaat
ctccgctcttctgttaaatccaccacctcatactgctcacgggatgggcggatagctaat
gacatgtacaataaagagcatgtgatgccttactcagccaataagactactgcataccca
gccccacgtggcgtcctaaactcagcccagttcagcaatagacgggtgtataaaaaaatc
cccagcctggagtcagatgtttag
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