Scomber japonicus (chub mackerel): 128378684
Help
Entry
128378684 CDS
T09718
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00330
Arginine and proline metabolism
sjo00480
Glutathione metabolism
sjo01100
Metabolic pathways
sjo04148
Efferocytosis
Module
sjo_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
128378684
09106 Metabolism of other amino acids
00480 Glutathione metabolism
128378684
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128378684
Enzymes [BR:
sjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
128378684
BRITE hierarchy
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
128378684
NCBI-ProteinID:
XP_053194227
LinkDB
All DBs
Position
18:6520393..6527193
Genome browser
AA seq
469 aa
AA seq
DB search
MKKMEKNTDHASVTLNKAVMEVLPPEPPCDTVILDNGRTINNFIDNKIKELDSLFNVGVI
STDLEKVLAVQMSMGIAHDNDLPFHVANLDSVFERHHRWLTHLPRVKPFYAVKCNNTPAV
IQMLRALDTGFDCASKGEIQLALSLGVTPDKIIYAHTTKPGFHIKYACAHGVDLMTFDNE
AELLKISQCHAKAKLILRIIVDDSKSLVRLSSKFGARLDTVEKLLERAKELGLEVIGVSF
HVGSGCTDSLVFKQAISDARHVFDLANLLGFQMTLLDIGGGFSGREDFQVNIEEFSEVIN
GALDKFFPPESGVQIIAEPGRYYVESAFTLVVNIIAKRVDMDHSDGEENSSNRMVYYIND
GVYGSLNCLINDPAHTSVTPYLHKAVDGSKQRYWSVIWGPTCDSLDKIIENYWIPELEVG
DWLLIDNMGAYSVSITSTFNGFEKAHIYPVVTAETWHALNLSHTNGIIN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatggagaagaacacagatcatgcatcagtaactctgaacaaagccgttatg
gaggttttgccccctgagcccccctgtgacactgtcattttagacaatggaaggaccatc
aacaatttcatagacaataaaataaaagagcttgattcattgtttaatgttggtgtcatc
tctacagacttggagaaggtcttagctgtgcaaatgagcatgggcatagctcatgacaat
gatctacccttccatgtggcaaatctagacagcgtgtttgagagacaccacagatggctt
actcacttacctcgagtcaagcctttctatgcagtgaagtgcaacaacacaccagcagtt
atccagatgctaagagctctggacacaggttttgactgtgccagcaagggtgagattcag
ttggccctgtcccttggagtgacgcctgataaaataatttacgcacatacaacaaaacca
gggttccacatcaaatatgcctgtgctcacggagtagacttgatgacttttgataatgag
gctgaactcctaaaaatttctcagtgtcatgccaaagccaaactaattctccgcatcata
gtggatgactccaaatccctggtaagactgagttcaaagtttggtgccagactggatact
gttgagaagctgctggaacgagctaaagagctgggcttagaagtcattggagtcagcttc
catgtagggagcgggtgcactgacagtttggtgttcaagcaggccatatcagatgcacga
catgtgtttgacctagcaaatttattgggcttccaaatgacactcctggatattggtgga
gggttttctgggagagaggacttccaagtgaacattgaagagttttcagaagttattaat
ggagcactggataaattcttcccacctgaaagtggtgtgcagataattgcagaaccaggc
cgatactatgtggaatcagccttcacactggtagtgaacatcattgccaaaagagtcgac
atggatcattcagatggtgaagaaaacagctccaacagaatggtctactacattaatgat
ggagtgtatggctccttgaattgcctcatcaacgatcctgcccacaccagcgttacacca
tatcttcacaaggctgttgatggcagcaagcagcgatactggtctgtcatctggggtcca
acctgcgacagccttgacaaaataattgaaaactactggatacctgagctggaagtgggg
gactggcttctcattgacaacatgggagcttactctgttagtataacctctaccttcaat
ggctttgaaaaagcacacatttatcctgttgtgactgcagagacatggcatgccttaaac
ctttctcacaccaatggcattatcaattaa
DBGET
integrated database retrieval system