Scomber japonicus (chub mackerel): 128382056
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Entry
128382056 CDS
T09718
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjo03016
]
128382056 (trdmt1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
128382056 (trdmt1)
Transfer RNA biogenesis [BR:
sjo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128382056 (trdmt1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
128382056
NCBI-ProteinID:
XP_053198009
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Position
21:27092280..27109404
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AA seq
409 aa
AA seq
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MEPLRVLELYSGIGGMHFALKESGIPAQVVAAVDINTTANQIYSHNFPGTPLWNKTIEGL
TLDDFNKLSFDMILMSPPCQPFTRIGLQGDIADPRTKSFLYILDLLPRLCRLPRFILLEN
VKGFESSSARGRLVTTLIKCGYTLQEIMVSPTSVGIPNSRLRYFLMAKISTEKVCTQISS
KSCSCVGDKISSDAIETKHLPLLNLNFEAFRHAAESDSTEQPTVLSLPHPDACQLEKEMQ
GCHVLFKLETTKDAQRKMNQNRDLSVRQIQDFLEPQMEVHMEHYLLPPKTLLRYALILDI
VRPTCRRSVCFTKGYGRYVEGTGSVLQCCMETELESVFRGLDQYTEEEKLQQLLKLKLRY
FTPREVANLMGFPQNFSFPEQIHTKQRYGVLGNSLNVVVVARLLQLLVS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagcctctgcgggtactcgagctttacagtgggataggagggatgcattttgcttta
aaagagagtggtatacctgcccaagtagtggctgccgttgacataaacaccactgccaat
cagatttacagtcacaatttccctggcactcccctctggaacaaaaccattgagggctta
acactagatgacttcaataaattatcttttgacatgattttgatgagccctccttgccag
cctttcaccaggataggactccagggtgacattgctgaccccagaaccaagagcttcctc
tacattcttgatcttctgccaaggctgtgcaggctgccccgcttcatcctgctggagaat
gtgaaaggctttgagagctcttctgccaggggacgtttggtgacaacactgataaaatgt
ggatacactttgcaggagatcatggtgtcacccacaagtgtggggatcccaaattcaaga
ctgcgttatttcctgatggctaagatttctacagaaaaagtttgcacccagataagttca
aagtcttgctcctgtgtaggagataagatttcttcagatgctatagaaacaaagcacctt
cctcttctgaacctgaattttgaagccttccgacatgccgctgagagtgattctactgag
cagcccaccgtcctgagtcttccccatccagatgcctgccagttggaaaaagaaatgcaa
ggatgtcatgtcctttttaaactagagacaacaaaggatgcccagagaaagatgaatcag
aacagggacctgtctgtcaggcagatccaagacttcctggaacctcagatggaagtacac
atggaacactatctccttccacctaaaacattgttgcgttatgctctgatcttggacatt
gttcgacccacatgcaggaggtctgtctgttttaccaaaggttatgggaggtatgtggag
ggaactggctcagtactgcagtgctgcatggaaacagagttggagagtgtgttcagaggt
ctggaccagtacactgaagaggagaaactgcagcagctgttgaaactgaagctgcgttac
tttactcccagagaagttgccaacctcatgggctttcctcaaaacttctccttcccagag
cagatccatacaaagcagcggtacggagttctaggaaacagcctgaatgttgtggtggtg
gccaggctcctgcagctgctagtctcctag
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