Scomber japonicus (chub mackerel): 128382121
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Entry
128382121 CDS
T09718
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta
KO
K04816
nicotinic acetylcholine receptor delta
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128382121 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128382121 (chrnd)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128382121 (chrnd)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
128382121
NCBI-ProteinID:
XP_053198079
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Position
21:3580503..3591749
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AA seq
521 aa
AA seq
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MKLQTAALSLVFLLTLLSSECWCRNEEERLINHLFKERGYVKELRPVEKQQDAVKVYLAL
TLSNLISLKEVDETLLTNVWIDHTWYDYRLTWNTTEFDGIDTLRLPPSMVWLPEIVLENN
NDAQFQVAYYSNVLVYSDGLCYWLPPAIFRSSCSINVNYFPFDWQNCTLKFTSLTYNAKE
IQMLLKEEGDGEKTWTVEWIIIDPAGWTENGEWEVHHRPAKRNTYKHIPIESNKHQDITF
YLIIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQR
LPETSMSVPLIVKYLMFIMVLVTVVVLNCVVVLNLHFRTPSTHVMSEWTKRFFLERLPRI
LHMSHPDEPEPHWDGALPRRSSSVGYIASAEEYYSVKSRSDLMFEKQSARHGLTARPTPV
AVKKLQEEGGVTEQLYGEIKPAVDGANYIIKHMRNKNDYNEEKDNWSGIARTVDRLCLFL
VTPVMTFGTIIIFLTGICNHPPSLPFAGDPHNYREENQRLL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccagactgcagctctgagccttgtgttcctcctcactctgctctcatctgag
tgctggtgcaggaacgaggaggagcgtctgattaaccacttatttaaggagcgtggatac
gttaaagagcttcggcccgtcgagaaacagcaggacgccgtcaaagtttacctcgccctc
acactctccaacctcatctccctgaaagaagtggacgagacgctgctgacgaacgtgtgg
attgatcatacatggtacgactatcggctgacctggaatacgacagagtttgatggcatc
gatactcttcgcctgccgcccagcatggtctggctaccggagatcgtgctggaaaacaat
aacgatgcccagttccaggttgcctactacagtaacgtgttggtgtattccgacggtctc
tgttactggcttcctcctgccatcttccgctcctcttgctccatcaacgttaactatttc
ccctttgactggcagaactgcacgctcaaattcacctctctgacgtataacgccaaagag
atccagatgctgctgaaagaagaaggggatggagagaagacatggacggtggagtggatc
atcattgatcctgctggttggacagagaacggagagtgggaggtccaccaccggccggct
aagaggaacacctataagcacattcccatagagagcaacaagcaccaggacatcaccttc
tacctgatcatcaaacgcaagcctctcttctacatcgtcaacatcatcatcccctgtgtg
ctcatctccttcctcgcctcgctcgtctactacctgccagccgacagcggtgagaagatg
acgttgtccatctcggtgctgctggctcagtctgtcttcctgctgctgatctctcaacgg
ctgccggagacgtccatgtctgttcctctgattgtcaagtatctgatgtttatcatggtg
ctggttacggttgtggtgttgaactgtgtagtcgtcctcaacctgcacttcagaacgccg
agcacacacgtcatgtctgagtggaccaagaggttcttcctcgagcgcctgcctcgcatc
ctgcacatgtcccaccccgacgagccggagccgcactgggacggggcgttgccacggcga
tccagctcggtgggatacatcgcctcggcggaggagtactacagcgtgaagtctcgcagt
gatctgatgttcgagaagcagtcagcgagacacggactgacagcacgaccaactccagtt
gcagtgaaaaagctgcaggaggaaggaggcgtgacagagcagctgtacggagagatcaag
ccggctgtggacggagcgaactacatcatcaaacacatgcgcaacaagaacgactacaac
gaggaaaaggataactggagtggcattgcccgcacggtggaccgcctctgtctcttcctc
gttaccccggtgatgacctttggcaccatcatcatcttcctcacgggaatctgtaaccat
cctccgtctctgcccttcgcaggagacccacacaactacagagaggaaaaccaacgcctg
ctgtaa
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