Scomber japonicus (chub mackerel): 128383301
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Entry
128383301 CDS
T09718
Name
(RefSeq) pyruvate carboxylase, mitochondrial-like
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00020
Citrate cycle (TCA cycle)
sjo00620
Pyruvate metabolism
sjo01100
Metabolic pathways
sjo01200
Carbon metabolism
sjo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
128383301
00620 Pyruvate metabolism
128383301
Enzymes [BR:
sjo01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
128383301
BRITE hierarchy
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
RnfC_N
ATP-grasp_3
HlyD_3
NQRA
ATPgrasp_ST
GCV_H
Motif
Other DBs
NCBI-GeneID:
128383301
NCBI-ProteinID:
XP_053198889
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All DBs
Position
22:10355136..10642281
Genome browser
AA seq
1179 aa
AA seq
DB search
MMRYAVVRGGLGLLAVRRVCVLPRFAHSAPQNEYRPIKKVMVANRGEIAIRVFRACTELG
IRTVAVYSEQDTGQMHRQKADEAYLIGKGLPPVAAYLHIPDIIKVAKDNNVDAIHPGYGF
LSERSDFAQACTDAGVMFVGPTAETVRKMGDKVEARSIAINAGVPVVPGTDSPISSLHEA
QVFAETYGFPIIFKAAYGGGGRGMRVVREYEELEENYQRAYSEALTAFGNGALFVEKFIE
KPRHIEVQILGDKFGNVIHLYERDCSIQRRHQKVVEIAPAFQLDPHLRDRLHADAVTLAK
QVGYENAGTVEFLVDKHGKHYFIEVNSRLQVEHTVTEEITDVDLVHAQLHVCEGRSLPEL
GLKQDKIRVNGCAIQCRVTTEDPARGFQPDTGRIEVFRSGEGMGIRLDSASAFQGAVISP
HYDSLLVKVIASGKDLPTAASKMSRALAEFRVRGVKTNIPFLQNVFSNHQFLHSTVDTQF
IDENQELFNLKPTQNRAQKLLHYLGHVMVNGPTTPIPVKAKPSAIDPVIPLVTMGDPPVG
FRDVLLRDGPEGFAKAVRAHQGLLLMDTTFRDAHQSLLATRVRTHDLKKISPFVSHNFNN
LYSLENWGGATFDVAMRFLSECPWKRLQELRALIPNVPFQMLLRGANAVGYTNYPDNAVF
KFCEVAKENGMDIFRVFDSLNYVPNMLLGMEAAGAAGGVVEAAISYTGDVSDPMRQKYSL
DYYLKLADELVKAGTHILCIKDMAGLLKPESSKLLIGALRDRFPDVPIHVHTHDTAGAGV
AAMLACAEAGADVVDVAVDSMAGMTSQPSMGAMVACAKGTKLDTGIALEKVFDYSEYWEV
ARGLYAPFDCTATMKSGNADVYENEIPGGQYTNLHFQAHSMGLGNKFKEVKKAYTEANKL
LGDLIKVTPSSKIVGDLAQFMVQNSLTRAEVEERADELSFPLSVVEFLQGYIGIPHGGFP
EPLRSKVLKSLPRIEGRPGASLPPMDFKALEEGLRASHGDDITPEDVMSAAMYPKVFQEF
KDFTSNFGPVDCLSTRLFLDGPKIAEEFEVELERGKILHIKALALGDLNKAGQREVFFEL
NGQLRSVLVKDTVAMKEMKFHPKAQKSIKGQVGAPMPGKVLEVKVEVGSKVEKGQPLCVL
SAMKMEMVVNSPLSGTVKAVHATVDSSLEGDDLILEIEE
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggtacgctgtagtccgtgggggcctcggcctattggctgtgaggagggtgtgt
gttctcccccgctttgcccattctgccccacagaacgagtatcgaccaatcaagaaagtc
atggtggctaatagaggtgagatcgctatccgtgtgttcagagcctgcactgaactgggg
attcgaaccgtggccgtctactctgaacaggacactggacagatgcacaggcagaaggca
gatgaggcatacctcatcgggaaaggcctgccacctgttgctgcatacctgcacattcct
gacatcatcaaagtagcaaaggacaacaatgtggatgccatccatccaggctacggtttc
ctctctgagcggtcagactttgcccaggcctgcaccgatgcaggagtgatgtttgtaggg
ccaactgcagaaacagtccgcaagatgggagacaaggtggaggctcgttccattgccatt
aacgcaggtgtacctgtggtcccaggaactgattcccccatatccagtctgcatgaggcg
caggtattcgccgagacgtatggcttccctattatcttcaaagcagcctatggaggtggt
ggtcgaggcatgagggtggtcagagagtacgaggagcttgaggagaattaccagcgggcc
tactctgaagccctgacagcttttgggaatggagccctgtttgttgaaaagtttattgaa
aaaccgagacacattgaagtacagatccttggcgataaatttggtaatgtcatccacctc
tacgagagagactgctccattcagcggagacaccaaaaggttgtggaaattgcgccggct
ttccaactggaccctcatctgagagaccgacttcatgccgatgctgtaaccctcgccaaa
caggtgggctacgagaacgcagggactgtggagttcttggtggacaaacatggcaaacac
tacttcattgaagtcaactcgcgactccaggttgaacacacggtcacggaagaaatcaca
gatgtggacctggtgcatgcccagctgcatgtgtgtgagggccgcagcctgccagaactc
ggcctcaaacaagacaagatcagggtgaatggctgtgccatccagtgcagagtgacgact
gaagacccagccagaggcttccaaccagacacaggcaggattgaggtattcagaagcggt
gaaggaatgggtatccgtctggacagcgcctcagcctttcagggtgctgtcatttcaccc
cactatgactccctgctggtcaaagtcatcgccagcgggaaggacctgcccacagcagct
tccaagatgagccgagcactggccgagttcagagtgcgaggggtcaagaccaacatccca
ttcctccagaacgtcttttccaaccaccagttcctccactccaccgtggacacccagttc
atcgacgagaatcaggaactgttcaacctcaaacccactcagaaccgggcccagaaacta
ctgcactacctcggtcatgtgatggtgaatggaccaaccacacccattccagtaaaggct
aagccctccgctatagaccctgtcatccctcttgtcactatgggcgacccaccggtaggt
ttccgtgacgtgctgctgcgtgacggccccgaggggttcgccaaggctgtccgtgcccac
caaggtctgttgctgatggacaccactttcagagatgcccaccagtcgctcctcgccacc
agggttcggacccacgacttgaagaagatctcaccatttgtcagccacaactttaacaac
ctttacagcctggagaactggggaggtgctacctttgacgtggctatgaggttcctgtca
gagtgtccatggaagagactccaggagctgagagctttgatccccaacgtcccatttcag
atgctgctgagaggggctaatgctgtgggctacaccaactaccctgacaatgctgtcttt
aagttctgtgaggtggccaaagagaatggcatggacatcttccgcgtgtttgattccctg
aactacgtgccaaacatgctgctgggcatggaggcggctggggcagcaggtggcgtagtg
gaggctgccatctcgtacacaggagatgtatcagacccaatgaggcagaagtactccctc
gactactatttgaaactagcagacgagctcgtcaaagccggaacccacatcctttgtatc
aaggatatggccggtctgctgaagccagagtccagcaagcttctgattggcgctctgaga
gatcgtttcccagatgtgcccatccacgtgcacactcatgacacagctggagccggtgta
gccgctatgctggcctgtgctgaggctggagctgatgtagtggatgtggctgttgactca
atggccgggatgacttctcagcccagcatgggagctatggtggcctgtgccaaggggaca
aagcttgacactggtatcgctctggaaaaggtatttgactacagtgaatattgggaagta
gccagaggcctctatgctccatttgactgcactgccaccatgaaatctggcaacgctgat
gtctacgagaatgagatacccggaggacagtacaccaacctccacttccaggctcacagt
atggggctgggaaataagttcaaggaggtgaagaaggcctacactgaagccaacaaacta
ctgggagacctcattaaggtgactccatcatcaaagatcgtgggcgacttggctcagttc
atggtgcagaacagcctgaccagggctgaggtggaggagagagcagatgagttgtccttc
cctctgtctgtggtggaattcctgcagggatacattggaataccacatggaggattccca
gagccgctgagatctaaggtgctgaagtccctcccccgtattgagggccgtcctggcgcc
tctctgccacctatggacttcaaggccctggaggaggggctccgagccagtcacggtgat
gacatcaccccagaagatgtgatgtcagcagccatgtaccccaaggtgttccaggaattt
aaagattttacttctaactttggaccagtggactgtctcagcaccaggctgttcctggat
ggacccaagattgctgaggaatttgaggtggagctggaaagaggaaagatcctccacatc
aaggcgctggcactgggtgacctgaacaaggctggccagagagaggtcttctttgagctg
aacggacagctgagatctgtgctggttaaagacacagtcgccatgaaggaaatgaagttc
caccccaaggctcagaagtccatcaagggtcaggtgggggcacccatgcctggaaaggtc
ctggaggtcaaagtggaagttggatccaaggtggagaagggtcagccactgtgtgtcctc
tcagccatgaagatggagatggtggtcaactcccctctgtccggcaccgtgaaggcagtc
catgccacagtcgactcatccctggagggagatgacctgatactggaaatcgaggagtag
DBGET
integrated database retrieval system
