Shewanella khirikhana: STH12_00360
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Entry
STH12_00360 CDS
T06711
Symbol
rlmA_1
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_00360 (rlmA_1)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
STH12_00360 (rlmA_1)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_00360 (rlmA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmA_N
Methyltransf_11
Glyco_transf_9
Trm112p
zf-Nse
Motif
Other DBs
NCBI-ProteinID:
AZQ09511
UniProt:
A0A3Q9E3K7
LinkDB
All DBs
Position
421815..422630
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AA seq
271 aa
AA seq
DB search
MQFQCPLCRQPLHAHQESKGWYCDGKHHFDRHAIGYWDFFPTRKPKNAESRDTLRARQFL
LTSGIYNAAIEALAKAARQYSAIEAPACVQQGAGHAWLGKQLKAALDEQGCQVSLFSPLE
AENEAFAAAKAGMENVCFTSLKGLPFADASVDMVWMLEAPLKGKEWLRILKPDGLLLMLV
PGPRHLWQLREFVYPELDEKPFSLELPQAFELLAEEAVSWPLAIQSQDAMVLMDMAPWAW
RVKEGVRKAIAKASFEALEMDFRIIVARKKA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcagtgtccactttgccgccagccgctgcacgcccatcaagagtccaaggga
tggtattgcgatggaaaacatcactttgaccgtcatgccatcggctactgggactttttc
ccaacccgtaagcccaaaaacgccgaaagccgcgacaccctaagagccagacaatttttg
ctgacatcgggcatctacaacgccgctattgaggcgctggcaaaggcggcgcgtcagtat
tcagctattgaggcgccagcgtgcgtgcagcagggggccggccatgcctggcttggcaag
cagctcaaggcggcgttggatgaacagggttgccaggtgtcgctgttcagtccgttggaa
gccgaaaacgaagcttttgctgccgccaaggctggtatggaaaacgtgtgttttacttcg
ctcaaaggcctgccgtttgccgatgcctcggttgatatggtgtggatgcttgaagcgccg
cttaagggcaaagagtggcttagaattctcaagcctgatgggttgctgctgatgttggtg
ccggggccgcgtcacttatggcagttgcgggagtttgtttatccagagctcgatgaaaag
ccgttttcgctggagttgccgcaagcctttgaactgctggcagaagaggctgtgtcctgg
cctttagccattcagtcgcaggatgcgatggtactgatggatatggcgccttgggcgtgg
cgggttaaagaaggcgtgcgtaaagccattgccaaggcaagcttcgaggcgctggagatg
gatttcagaattatcgtggcccgcaaaaaagcctga
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