Shewanella khirikhana: STH12_00507
Help
Entry
STH12_00507 CDS
T06711
Symbol
deoC
Name
(GenBank) Deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
skh
Shewanella khirikhana
Pathway
skh00030
Pentose phosphate pathway
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
STH12_00507 (deoC)
Enzymes [BR:
skh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
STH12_00507 (deoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
AZQ09654
UniProt:
A0A3S9L260
LinkDB
All DBs
Position
583939..584712
Genome browser
AA seq
257 aa
AA seq
DB search
MSDLKKAAQRAIELMDLTTLNDDDTAEKVIELCKKAVTPAGHTAAICIYPRFIPIARKTL
IELDADDIQIATVTNFPHGNDDIAIAVLETRAAVAYGADEVDVVFPYRALMEGNETVGFE
LVKACKEACGDDVLLKVIIESGELKDPALIRKASEISIDAGADFIKTSTGKVPVNATLEA
AEIMLTVIAEKNREVGFKPAGGVRDAAAAAEFLGTAARILGEDWVTPRTFRFGASSLLSS
LLHTLELAEAPKGAQGY
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttaaaaaagcagcccagcgtgccattgagttgatggacctcactacgctg
aacgatgacgacactgcagagaaagtcatcgagctttgcaaaaaggccgtcaccccagca
ggtcacactgccgctatctgtatctatccccgttttattcctatcgcacgcaagacgctg
attgagcttgatgccgatgatatccagattgccactgtgactaacttcccccacggtaac
gacgacatcgccattgctgtgctcgaaacccgcgccgccgtagcttacggtgccgatgaa
gtggacgtggtattcccataccgtgcgctgatggaaggcaacgaaactgtcggttttgaa
ctggtgaaagcctgtaaagaagcttgcggtgacgatgtacttttgaaagtcatcatcgag
tccggcgagctgaaagacccagcccttatccgcaaggcctctgaaatctctatcgatgcc
ggcgctgactttatcaagacttctaccggtaaagtgcctgtgaacgccaccctggaagca
gctgaaattatgctgaccgtgattgccgaaaagaaccgcgaagtaggcttcaagcctgcc
ggtggcgtgcgtgatgccgctgctgccgccgagttcctgggcaccgctgcacgcattctg
ggtgaagattgggtgactccacgtaccttccgcttcggtgcttccagtctgcttagcagt
ctgctgcacaccctggagctggcagaagcaccaaaaggcgcccaaggctactaa
DBGET
integrated database retrieval system
