Shewanella khirikhana: STH12_01259
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Entry
STH12_01259 CDS
T06711
Symbol
rlmL
Name
(GenBank) Ribosomal RNA large subunit methyltransferase K/L
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_01259 (rlmL)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
STH12_01259 (rlmL)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
STH12_01259 (rlmL)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_01259 (rlmL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
Cons_hypoth95
Methyltransf_31
Methyltransf_25
THUMP
MTS
Methyltransf_11
Met_10
N6_N4_Mtase
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AZQ10386
UniProt:
A0A3Q9E6P6
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All DBs
Position
1442886..1445012
Genome browser
AA seq
708 aa
AA seq
DB search
MFNFFAAAPKGFEYALAKELEALGASEVRESVAGVYFSANLEQGYRITLWSRLASRIVII
LFNGECETPEQLYNAAYSIDWPSHFSNRCTFSIDFHGTGGFIKNSQFGALKIKDAVVDRF
RDDDQARPDVVKGTPDIRIDAHYGRGKITIGLNFSGPALHQRGYRGNTGEAPLKENLAAN
MLYRSGWSENPTALLDPFCGSGTVLIEAAMMACDMAPGLLRERFGFEHWNRHNSAVWTQV
KEEAKARASLGKSRCELKFYGSDIDSRVVALAKRNANAAGVFEFIELKVANVLNIEPPVE
GGMLLTNPPYGERLGNVTSLLQLYFQLGEKFKQSFGGWKLGLLCSDMELVSSLKLKADKQ
MKMFNGALECAFNLYTLHANSTRREVAPEQASQGGEIAAPFANRLKKNVKQLEKWAKREG
IDSYRLYDADIPEYNVAVDRYLDYVVVQEYAAPSSIPEAVTKRRLTDVLLALPRALGIDP
DKIVLKTRERQKGTNQYQKLDAEKLELTTTEYGCLFKLNLSDYLDTGLFLDHRLTRKLVG
EKSRGRDVLNLFAYTGSASVHAGKGGAKSVTTVDMSNTYLNWAKDNFMLNGLVGRQYRFE
QADCLQWIRDCQQTFDLIFIDPPTFSNSKRMEDSFDVQRDHVALLVSLKRLLNPGGEILF
SNNKRKFKMDMEALNAEGLKAINIDDKVLPMDYARNPQIHNCWVVTHG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacttttttgccgctgcccccaagggctttgaatatgcactcgccaaggagctt
gaagccctgggcgcctctgaggtgcgtgagagcgtagccggtgtttatttcagtgccaac
ctggagcagggctaccgtattaccctgtggagcagactggcaagccgtattgtcattatc
ctgttcaatggcgaatgcgaaacccctgagcagctttataacgcggcgtacagcatcgat
tggccttcccatttctcgaatcgctgcacattcagcatcgattttcacggcaccggtggc
tttatcaaaaacagccagtttggtgcgctcaagattaaagacgccgtggtcgaccgcttc
cgtgatgatgaccaggcccgcccggacgtggtgaaaggtaccccggacattcgcatcgat
gcccactatggccgaggcaagatcaccattggccttaatttctcaggccctgcactgcac
cagcgtggctaccgcggaaacacgggtgaagcgccgctgaaagaaaacctggcggccaac
atgttgtatcgcagtggctggtcagagaacccaaccgctttgcttgaccctttctgtggc
agcggcactgtgctgattgaagcggccatgatggcctgcgatatggcgcctggtttgctg
cgcgagcgttttggttttgagcattggaaccgccataactccgcggtctggactcaggta
aaagaagaagccaaggcccgcgcctctttgggcaaaagccgctgtgagcttaaattctac
ggctcggatatcgactcgcgggtggtcgcccttgccaagcgcaacgccaatgccgccggt
gtgttcgaatttattgaactcaaagtggccaatgtgctgaacatcgaaccgccggttgaa
ggcggtatgctgctgaccaacccgccctatggcgagcgtttgggcaacgtgaccagcttg
ctgcagctttacttccagcttggcgaaaaattcaagcaaagctttggtggctggaaactc
ggtctgctgtgcagcgatatggagttggtgtcatcgcttaaactgaaagcagacaagcag
atgaagatgtttaacggcgcactggaatgtgcctttaacctctacaccctgcatgccaac
agtacccgccgtgaagtggcccctgagcaggcaagccagggtggtgaaattgctgcgccc
tttgccaatcgcctcaagaaaaacgtcaaacagctggagaagtgggccaagcgtgaagga
atcgacagctatcgcctgtacgatgccgatatccccgaatataacgtggcggtggacaga
taccttgattacgtggtggtgcaggaatacgccgcgccatcgtctatccctgaagccgtg
accaagcgccgtctgaccgacgtactgctggccttgccacgggcgctgggtatcgatccc
gacaagattgtgcttaagacccgcgagcgccagaagggcaccaaccagtatcaaaagctg
gacgccgaaaagctggaactgaccaccaccgaatacggttgtcttttcaagctgaactta
agtgattacctggataccgggcttttcctcgaccacagactgacccgcaaactggtgggt
gaaaagtccagggggcgggatgtgcttaacctgtttgcctacacaggctctgcctcggtg
catgccggtaagggcggcgccaagtcggtgaccacagtggatatgtccaacacctacctt
aactgggcaaaagataactttatgctcaatggtttggttgggcggcagtacaggttcgag
caggccgactgcctgcagtggatccgtgactgtcagcagacgtttgatttgatttttatc
gacccgccgactttttcgaactccaagcgcatggaagattctttcgatgtgcagcgcgac
catgtggccttgttggtatcactgaagcgcttgctgaatcccggcggcgaaatcctgttc
tccaacaacaaacgcaagttcaagatggatatggaggcgctgaacgccgaagggctcaag
gcgatcaatatcgacgataaagtgctgccgatggattacgcccgtaacccgcaaatccat
aactgctgggtagtgacccatggctga
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