Shewanella khirikhana: STH12_04146
Help
Entry
STH12_04146 CDS
T06711
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
skh
Shewanella khirikhana
Pathway
skh00130
Ubiquinone and other terpenoid-quinone biosynthesis
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01240
Biosynthesis of cofactors
Module
skh_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
STH12_04146 (ubiD)
Enzymes [BR:
skh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
STH12_04146 (ubiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AZQ13172
UniProt:
A0A3Q9E8E2
LinkDB
All DBs
Position
complement(4702274..4703755)
Genome browser
AA seq
493 aa
AA seq
DB search
MSFKDLRSFISHLEECGELKRVDYPVDPYLEMTEIADRVLRAGGPALLFENPKGHSMPVL
ANLFGTPKRVAMALGKEDPLALRDVGELLAFLKEPEPPRGFKDAIAKIPMFKQALNMPPK
TVSRAPCQEVVMTGDDVDLTKLPIQHCWPGDVAPLVTWGLTITKGPRQKRQNLGIYRQQL
LGKNKLIMRWLSHRGGALDFRDFQEKHPGENYPVVVALGSDPVTILGAVTPVPDSMSEYA
FAGLLRGERTEVVKALSCDLEVPATSEIILEGYIAPGEMAEEGPYGDHTGYYNETDSFPV
FTVTHITHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIVDFYLPPEGCSY
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDEDVNCRDWQDVIWAITTRMDP
TRDTVMIDNTPIDYLDFASPVAGLGSKMGLDATNKWEGETTREWGTPIVMDESVKQKVDS
IWDELGIDQAPTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcagctttatcagccacctcgaagagtgcggcgagcttaag
cgcgtcgactatccggttgatccttatcttgaaatgacagaaatcgctgaccgcgtactg
cgcgcgggcggcccggcgctgctgtttgaaaaccccaaggggcacagcatgccggtactg
gcaaacctgtttggcacgccaaaacgcgtggccatggcgctgggtaaagaagacccgctg
gcgctgcgcgatgtgggcgagctgctggcgttcctcaaagaacccgagccaccacgcggc
tttaaagatgccatcgccaaaatccccatgttcaagcaggcgctgaatatgccgcccaag
acagtgagccgggcgccctgtcaggaagtggtgatgacaggcgacgatgttgacctgacc
aagctgcccattcagcactgctggcccggcgacgttgcgccgctggtgacctggggcctg
accatcaccaagggtccacggcagaagcgtcagaacctcggcatctaccgtcagcagctt
ttgggcaaaaacaagctgattatgcgctggttgtcccaccgtggcggcgcgctggatttc
cgcgatttccaggaaaaacacccgggcgaaaactacccggtagtagtagcactgggctca
gatcccgtgactattttgggtgcggtaacccctgtgcctgactccatgagcgaatatgct
tttgcgggcctgttgcgcggcgaacgtaccgaggtggtgaaggcgctgtcctgcgacctt
gaagtgccggccaccagcgaaatcatcctcgagggctatatcgcccccggcgagatggcc
gaagaaggtccctacggcgaccacaccggctactacaacgaaaccgacagcttccctgtg
tttaccgtgacccacattacccacaggaaagacgccatctaccacagcacctacaccggc
cgtccaccggatgaacctgcgatgctgggggtggcactgaacgaagtattcgtgccgatt
ttgcgcaagcaatatcctgaaatagttgatttttacttgccccccgaaggttgttcctac
cggatggcagtgatctccatccgcaagcaatacccgggtcatgccaagcgggtgatgatg
ggcgcttggtcgttcctgcgccagtttatgtacaccaagtttattgtggtggtggatgaa
gacgtgaactgccgcgactggcaggacgtgatttgggccatcaccacccgcatggatccg
acccgcgataccgtgatgatagacaacacccccatagactatctcgactttgcctcgccg
gtggcgggtctgggctccaaaatgggtctggatgccaccaacaagtgggaaggcgagacc
actcgcgaatggggcaccccaatcgtgatggatgagtcggtgaaacaaaaggtcgacagt
atctgggacgagcttggcatagatcaggcgccaacactgtaa
DBGET
integrated database retrieval system
