Sinorhizobium kummerowiae: PZL22_002206
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Entry
PZL22_002206 CDS
T09063
Symbol
cobN
Name
(GenBank) cobaltochelatase subunit CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00860
Porphyrin metabolism
skm01100
Metabolic pathways
skm01240
Biosynthesis of cofactors
Module
skm_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PZL22_002206 (cobN)
Enzymes [BR:
skm01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
PZL22_002206 (cobN)
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Thrombin_light
Erythro-docking
Motif
Other DBs
NCBI-ProteinID:
WHS94481
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Position
complement(824542..828360)
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AA seq
1272 aa
AA seq
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MHLLLAQKGTIADGNEAIDLGQSPGDILFLSAADTELASIAAAHRQRAGARSLRIASLMN
LMHPMSVDTYVERTARHAKLIVVRPLGGASYFRYVLEALYAAAVANKFQIAVLPGDDKPD
PGLDPFSTVSVEDRQRLWAYCTEGGAENAGLFLDYAQALIDGGDKPQPARSLLKAGIWWP
GRGVIGVEEWVRLSELRRAVPTAQADRAEHEPTVAVCFYRALVQSGETKPVEALIEALAA
EGVRALPVFVSSLKDPVSIGTLEAVFAEALPDVVMNATGFAVSAPGADRQPTVLESGGAP
VLQVIFSGSSREAWETSAQGLMARDLGMNVALPEVDGRVLSRAVSFKAASVYDPLVEANI
VGHEPLADRARFAARLAANWTKLRRTRPEGRRVAIVMANYPNRDGRLGNGVGLDTPAGTI
EVLKAMTAEGYAVGNVPDDGDALIGFLMAGPTNAASRDREIRETISLNRYKGFFDALPKK
IQEEVTARWGAAQADPFFIDGVFALPLARFGDVLVGIQPARGYNIDPKETYHAPDLVPPH
GYLAFYAYLREVFGAHAIVHMGKHGNLEWLPGKALALSEECYPEAIFGPMPHLYPFIVND
PGEGTQAKRRTSAVIIDHLTPPLTRAESYGPLKDLEALVDEYYEAAGGDPRRLRLLSRQI
LDLVRDIGLDHDAGIEKGDSENQALEKLDAYLCDLKEMQIRDGLHIFGLAPEGRLLTDLT
VALARVPRGLGEGGDQSLQRAIAVDLGLHAASRSQPFDPLDCVMSDPWAGLKPDLLAALS
DAPWRTAGDTVERIELLAAKLVSGEIACPVGWTNTRAVLAVIETRLKPSIQSSGEAEIKG
LLTGLDGRFVAPGPSGAPTRGRPDVLPTGRNFYSVDSRSVPTPAAYELGKKSAELLIRRY
LQDHGEWPSSFGLTAWGTSNMRTGGDDIAQALALIGAKPVWDMASRRVTGYEIVPLAVLG
RPRVDVTLRISGFFRDAFPEQIALFDKAVRAVGALDEDDADNMIAARMRAETRRWEERGA
DAKEARRRASYRVFGSKPGAYGAGLQALVDEKGWETRGDLAEAYLTWGGYAYGAGEDGKA
ERGLFEERLRSIEAVVQNQDNREHDLLDSDDYYQFEGGMSAAAEHLGGQRPAIYHNDHSR
PEKPVIRSLEEEIGRVVRARVVNPKWIDGVMRHGYKGAFEIAATVDYMFAFAATTGAVRD
HHFEAAYQAYIADEKVLGFLREKNPAALSEISERLLEAIDRGLWNPRSNSARFELNSLSG
RAATDRLMAGNQ
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcctcctagctcagaaaggaacgatcgccgacggtaatgaggcgatcgacctc
ggacagagcccgggcgacatattgttcctgtcggcggccgatacggaacttgcctcgatc
gcggctgcccatcgtcagcgcgcgggcgcaagaagcctgcggatcgccagcctgatgaat
ctcatgcaccccatgtcggtcgacacctacgtcgaacgcacggcgaggcatgcgaagctg
atcgtcgtacggccgctcggtggtgcgagctacttccgttacgtcctggaggcgctctac
gccgcggcggttgcgaataaattccagatcgccgtgttgccgggcgacgacaagccggac
ccgggcctcgacccgttttccaccgtctcggtggaagaccggcagcgcctttgggcgtat
tgcaccgaaggcggcgcggagaatgccggccttttccttgattacgcgcaggcattgatc
gacggcggcgacaagccgcagccggcgcggtcgctgctcaaggccggcatatggtggccg
ggcaggggcgtgatcggcgtcgaggaatgggttcgcctatccgaactgcgtcgggctgta
cccaccgcgcaggcggacagagcggaacacgaacccaccgtcgccgtctgcttctaccgc
gcgctcgtccagagcggggagacgaaaccggtagaggcgctgatcgaggcgcttgcggcc
gagggcgtgcgggcactccccgttttcgtctccagcctcaaggatccggtctcgatcggc
acgctcgaagcggtcttcgccgaagcccttccggatgtcgtgatgaacgccacgggcttt
gccgtttccgcaccgggcgcggaccgccagccgaccgtgctcgaatcgggcggcgcgccg
gtgctgcaggtcatcttttccgggtcgtcgcgggaggcctgggaaacttcggctcaaggg
ctgatggcccgcgatctcggcatgaatgtcgcgttgccggaggtggacgggcgggttctc
tcccgtgccgtttccttcaaggcagcctcggtttacgacccgctggtggaggccaatatc
gtcggccacgagccgcttgccgatcgcgcgcgcttcgcggcacgcctcgccgccaattgg
acgaagctgcgccggacccggcccgagggccgccgggtcgcaatcgtcatggccaactat
ccgaaccgcgacgggcgcctcggaaacggcgtgggtctcgatacgcctgccggcacgatt
gaagtgctgaaggcgatgacggcagaaggctacgctgtcggcaatgttcctgatgacggc
gacgcgctgatcggctttctgatggccgggccgaccaatgcggcgagccgcgaccgggaa
atccgcgaaaccatttccttgaatcgctacaagggtttcttcgacgcgcttccgaaaaag
attcaagaggaagtgaccgcgcgctggggtgcggcgcaggccgatcccttcttcatcgac
ggcgtattcgccctgccgctcgcgcgcttcggcgatgtgctcgtgggcatccagccggcg
cgtggctacaacatcgatcccaaggaaacctatcacgctccggacctcgtgccgccgcac
ggctatctggctttctatgcctatctgcgcgaggtcttcggcgcccatgcgatcgtccat
atgggcaagcacggcaacctcgaatggcttcccggaaaggcgctggcgctttccgaagaa
tgctaccccgaggcgatattcggcccgatgccgcatctttatcccttcatcgtcaacgat
cccggcgaaggcactcaggccaagcggcggacgagcgccgtcatcatcgaccatctgacg
ccacctttgacgcgggcggagtcctacggaccgctcaaggacctggaggcgctggtcgac
gaatattacgaggctgcgggcggcgatccgcggcggctcaggctgctcagccggcagatc
ctcgatctcgtccgcgacatcggcctcgaccacgacgccgggatcgagaagggcgacagc
gagaaccaggcgctcgaaaaactcgacgcctatctctgcgacctcaaggaaatgcagatc
cgcgacggcttgcatatcttcggcctggcgccggaaggacggcttttgaccgacctcacg
gtcgcgctcgcccgtgtgccgcggggtctgggtgagggcggagatcagagcctgcaacgg
gcaatcgcggtggacttggggttgcacgcggcttcacgctcgcaacccttcgacccgctc
gattgcgtcatgtccgacccctgggccggcctgaagcccgatcttctcgccgccctctcg
gatgcgccatggcgcaccgccggcgacacggtcgagcgcatcgaactgcttgcggcgaag
ctcgtttcaggcgaaatcgcctgtccggtgggatggaccaacacccgcgccgtacttgcc
gtgatcgagacgcggctgaagccttcgatccaaagctccggcgaggcggaaataaagggt
ctgctgacgggcctcgacggccggtttgtcgcccccggtccctcgggtgcgccgacgcgc
ggccgtccggacgtgctgccgacggggcgcaacttctattcggtggacagccggtccgtg
ccgaccccggcggcctacgagctcggcaagaaatcggcggagctgctcatccgccgctac
ctgcaggaccatggcgaatggccgtcctccttcggtctcacggcctggggcacctccaac
atgcgtaccggcggagacgatatcgcccaggctttggcactgatcggagcaaagcccgtc
tgggatatggcctcgcgccgcgtgaccgggtacgaaatcgttccgcttgccgttctcggc
cgtccccgtgtcgacgtcaccctgcgtatttccggcttcttccgcgacgcctttcccgag
cagatagcactcttcgacaaggcggtccgcgcggtcggcgcgctcgacgaggacgatgcc
gacaatatgatcgccgcccgcatgcgtgccgaaacgcggcggtgggaagagcggggcgcc
gacgcgaaggaggctcgacgccgtgcctcctatcgcgtcttcggttcgaaacccggcgct
tacggagcgggcctgcaggcgcttgtcgacgagaagggctgggaaacgcgcggcgatctt
gccgaggcttacctcacctggggcggctacgcctacggtgccggcgaggatggaaaggcg
gagcgcggccttttcgaggagcgtctgcgctcgatcgaagccgtggtccagaaccaggac
aatcgcgagcacgatctgctcgacagcgacgactactaccagttcgaggggggcatgagc
gccgcggccgagcatctcggcggccagcgcccggccatctaccacaacgaccattcgcgc
cccgaaaagccggtcatccgctcgctcgaggaggagatcggccgcgtggtgcgtgcccgc
gttgtcaatccgaagtggatcgacggcgtgatgcgccacggctacaagggagccttcgaa
atcgccgcgacggtcgattacatgttcgccttcgctgcgaccaccggggcggtccgcgat
catcacttcgaggcagcctatcaggcctatatcgccgacgagaaagtcctcgggttcctg
cgcgaaaagaacccggccgcgctttcggaaatatcggagaggctgctggaggcgatcgac
cgcggcctatggaacccgcgctccaattcggcgcgattcgaactgaacagcctttccggc
cgcgcggctaccgaccgtctgatggccggaaatcaatag
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