Saccoglossus kowalevskii (acorn worm): 100370989
Help
Entry
100370989 CDS
T04123
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03020
RNA polymerase
sko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100370989
09124 Replication and repair
03420 Nucleotide excision repair
100370989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100370989
03019 Messenger RNA biogenesis [BR:
sko03019
]
100370989
03400 DNA repair and recombination proteins [BR:
sko03400
]
100370989
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
100370989
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100370989
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100370989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
100370989
NCBI-ProteinID:
XP_002731309
LinkDB
All DBs
Position
Un
AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGRIQ
PSRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPLSCFVSRHSIPSDMEFD
PNSNPPCYKTQDEDVVIQQDDEIRLKIVGTRVDASDIFAIGSLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcacatatctttagaacatgagatattacttcatcccagatattttggacct
aatctacttaacacagtgaaacagaagttatttactgaagtggaaggaacatgtacagga
aaatatggatttgttatagcagtaactacgatagataatataggagctggtaggattcaa
ccaagtcgaggattcgtgctgtatccagtcaaatataaagctattgtattcagaccattt
aaaggagaggttgttgatgctgtagttacacaagtcaacaaggttggtcttttcactgag
attggaccactttcctgttttgtatccagacattccattccatcagatatggagtttgat
cccaattccaatcccccatgttacaagacacaagatgaggatgttgtcatacaacaagat
gatgaaattaggttaaagatagtaggaacaagagtagatgcttcagatatctttgcgata
ggatcacttatggacgattacctgggtcttgttagctga
DBGET
integrated database retrieval system