KEGG   Saccoglossus kowalevskii (acorn worm): 100370989
Entry
100370989         CDS       T04123                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03020  RNA polymerase
sko03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100370989
  09124 Replication and repair
   03420 Nucleotide excision repair
    100370989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sko03021]
    100370989
   03019 Messenger RNA biogenesis [BR:sko03019]
    100370989
   03400 DNA repair and recombination proteins [BR:sko03400]
    100370989
Transcription machinery [BR:sko03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100370989
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100370989
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100370989
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 100370989
NCBI-ProteinID: XP_002731309
LinkDB
Position
Un
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGRIQ
PSRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPLSCFVSRHSIPSDMEFD
PNSNPPCYKTQDEDVVIQQDDEIRLKIVGTRVDASDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcacatatctttagaacatgagatattacttcatcccagatattttggacct
aatctacttaacacagtgaaacagaagttatttactgaagtggaaggaacatgtacagga
aaatatggatttgttatagcagtaactacgatagataatataggagctggtaggattcaa
ccaagtcgaggattcgtgctgtatccagtcaaatataaagctattgtattcagaccattt
aaaggagaggttgttgatgctgtagttacacaagtcaacaaggttggtcttttcactgag
attggaccactttcctgttttgtatccagacattccattccatcagatatggagtttgat
cccaattccaatcccccatgttacaagacacaagatgaggatgttgtcatacaacaagat
gatgaaattaggttaaagatagtaggaacaagagtagatgcttcagatatctttgcgata
ggatcacttatggacgattacctgggtcttgttagctga

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