Saccoglossus kowalevskii (acorn worm): 100373327
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Entry
100373327 CDS
T04123
Name
(RefSeq) poly [ADP-ribose] polymerase 4-like
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100373327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sko03032
]
100373327
03036 Chromosome and associated proteins [BR:
sko03036
]
100373327
03400 DNA repair and recombination proteins [BR:
sko03400
]
100373327
Enzymes [BR:
sko01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
100373327
DNA replication proteins [BR:
sko03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100373327
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100373327
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100373327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
BRCT
BRCT_2
PARP_reg
VWA
PTCB-BRCT
VWA_CoxE
VWA_2
14-3-3
RTT107_BRCT_5
BRCT_3
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
100373327
NCBI-ProteinID:
XP_006818703
LinkDB
All DBs
Position
Un
AA seq
1310 aa
AA seq
DB search
MGIFTKCQITLELGTSIQFKKKQEIKKKITENDGIISYIITKKTTHLVVSNPEKADTSYK
MRQAIKYDIPVVSMDFIYQCVEKQKLLDPDQYIVYGTSRTGEFSSGKIVDRYEVAKSAVL
CSQRKDHENGQTNFCVLEIHIVPIDDINDDKSGDSSYKYRVFTHSGILDEMKNEDCGSKE
CRYFESSDEALDCYTHLYEQQESKPHNLRKTQKMISRNIGSRKFRKVMLEMQEGWSLSSG
VSALVEHVWEEATGQLEDILSVSVESLKTENVEKAEALLLQLKRALDNVLSDSEIMELSK
EFYSFIPHKEDFKVINSKSVIAKKQELCQLIRDIVSVSEATDWSTRSDVEAKYKALRCHI
EHLENEDDSEYKNIKDLVISSQICDTKIKIENIYAVVRSIEESFFTQNTGNVRLLFHASK
PVNFVGILSRGLLLPRVVVDDFGGTRTDPGMLGHGIYFADSSSTSAKYSLPSTKSGCRFM
LVNEVALGRCKEFNQYCKNLTAAPDGFDSVHGVRGTKQQSSDFKDDEYVVYNTNQQRIRY
LVEFTLPSDTVKSLSSRSVTFGVTDDSSSESSIELNDVHCISDPMSKVKPGLVSTSDSPV
PLKSVNVRARIMDLVAQVIVLQAYTNENSVAIEAKYVFPLDTMAAVVGFEAFINGKHIIG
EVKEKETAHREYKEAISEGHGAYLMDEETPDVFTVSVGNLPPKASVLIKITYVTELSVDG
EKILFFLPGSVAPWTKDTALSQEIQKDVKTVKVDKVGHGSVSVQASIEMPFDIRNLESPT
HEINIKRTATKAVVELVKDSVLGDSFQLLIGLAEIHVPRMWVEKHPDKQDSQACMLTFYP
EFEADSVADCEVIFLVDLSNSMKSCSLEAQKVIMLCVLNLPDTYRFNIVVFGTAYDELFP
SSRLKSKSTLRAAKDFAARCFANMGNTEAWRPLHSFYCLRPSQGVRNVFLISDGHINNQE
STIEDVRKNCQHTRVFTFGVSCTANHHILQSMARVGAGAYEYFDSKTKSKWERKVKSQIS
KAAQPVLTSVNVEWQQFDSNSPIPVQAPSHIVSLFSGSRQVVYGFVPHCTQATLKAEIDD
HFVSTMVSTADLNITEGKILHQLTARAIIRDWEDGTLDIDRTEHEVKKTEQKDYIINISK
EFSIVTQFTSFVAIEKREKEEDLSPQGPSIEELVAKEDVDILMYVGWEEGKKDKEIKLSG
EEQIKQLLDGAKKDETLSNILKAERSYQQAYEVATKELSASHPLRILCDVLIVGLTVDLV
CLECDILVVGLTVDLVCLECDVLVVGLTMDLVCLECKLALPKTPLNADRK
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggggatatttaccaagtgtcagattacacttgaacttggtacaagtatacagtttaaa
aagaaacaagaaataaagaagaaaattacagaaaatgatggtattatctcttatatcatc
actaaaaagactacccaccttgtcgtgagtaacccagagaaggctgacacatcatacaaa
atgagacaagccataaagtatgacattcctgtcgtatccatggattttatttaccagtgt
gtggagaaacaaaaactacttgatcctgatcaatacatcgtctatggaacttcccggact
ggggaattcagttctggaaaaattgttgaccgatatgaagttgctaaaagtgcagttttg
tgcagtcagagaaaggaccacgaaaatggacagactaatttctgcgttcttgaaatacac
attgttccaattgatgatattaatgatgataagtcaggtgacagttcctataaatataga
gtgtttactcattctggaattttagatgaaatgaagaatgaagactgtggttcaaaggaa
tgccgttattttgaaagcagtgatgaagctttggattgctacacacatctgtatgaacaa
caagaaagtaaaccacataatttgaggaaaacacagaaaatgatttccagaaatattggg
tctcggaaatttcgaaaggtaatgttagagatgcaggagggttggtcgttgtcatcaggt
gttagcgctttagtagaacacgtctgggaagaagctacaggacagttagaagatattctc
tcagtcagtgtggaaagtctgaaaacagaaaacgtcgaaaaagctgaagctcttctactg
cagttgaaaagagctttagataatgttttaagtgattctgagataatggagttatccaag
gagttttatagtttcattccacataaagaagactttaaagtgattaattcaaaaagtgtt
attgcaaagaaacaagaactttgtcagctgatcagagacattgtaagtgtgagtgaagcc
actgattggtcaactcgtagtgacgttgaagccaagtacaaggcattacgatgtcatatt
gaacacctagaaaatgaagatgattctgaatataaaaacatcaaagatttagtgatatct
agtcaaatctgtgatacaaagataaagattgagaacatctatgccgtagtcagatctatt
gaagaaagtttttttacacaaaacactggtaatgttaggctgttatttcatgcctctaaa
cctgttaattttgtgggtattttatcaaggggattgttgttacccagagttgtagttgat
gactttggaggaactcgtaccgatcctggaatgctcggtcatggaatctattttgctgat
tcatcaagtacaagtgctaaatacagtttaccaagcactaaaagtggatgtagattcatg
cttgtaaatgaagtagctcttggcagatgtaaggaatttaatcagtattgtaaaaacctg
acagcagctcctgatggatttgatagtgtacacggagtgagaggaacaaaacaacaatca
tcagattttaaggatgatgaatatgtggtatacaacacgaatcaacaaaggatccgctat
ctggttgagttcactcttcccagcgacactgtgaaatcattatctagcagatcagttact
tttggagtaactgatgactcctcatcagaatcctcaattgaattgaatgatgtacattgc
atttctgatccaatgagcaaagtgaaaccaggtttggtatcaacgagtgacagcccagta
cctttgaaatctgtcaatgttagggcacgaattatggaccttgtagcgcaggttatagta
ttacaggcttacaccaatgaaaacagtgtagctatagaggccaagtatgtgtttccatta
gacaccatggctgctgtggtagggtttgaagcatttatcaatggtaaacatatcatagga
gaagtcaaggagaaagagacggcacacagagaatacaaagaagccattagtgaaggacat
ggggcatatttgatggatgaggaaacacctgatgtattcacagtcagtgtgggtaatcta
ccacctaaggctagtgtacttattaaaataacctacgtcacagagttgtcagtggatggc
gaaaagatcttgttttttcttcctggtagtgttgcaccatggaccaaagacactgcattg
tctcaagaaatacagaaagatgtcaagactgttaaagttgataaagttggtcatggtagt
gtgagtgtacaagcttcaattgagatgccttttgatatcaggaatctggaatctcctaca
catgaaatcaacatcaagcgtactgcaactaaagctgtggtggaattagtgaaggattct
gtacttggtgatagtttccagttgctgattggtttagcagagatacatgtaccaagaatg
tgggtggaaaaacatccagataaacaagatagtcaggcatgcatgttgacattctatcca
gagtttgaggctgatagtgtagctgactgtgaagtgatatttctagtagatttatctaac
tcaatgaaaagttgtagtttagaagcccagaaagtcattatgttgtgtgttctgaattta
ccggacacttatagatttaatattgtggtatttggaacagcatatgatgagttatttcca
agcagtcgtcttaaaagcaagtcaacattgagagctgctaaagattttgcagctagatgt
tttgccaatatgggcaatacagaagcatggagaccattacattcattctattgcctcaga
ccttctcaaggtgtaaggaacgtcttcttgatatcagatggacatattaataaccaggaa
tccaccattgaggatgttcgaaagaactgtcagcacaccagagttttcacatttggtgtc
agttgcactgctaatcaccatattctgcagtcaatggctagagttggtgctggtgcctat
gagtattttgacagtaaaaccaaatctaaatgggagagaaaggtcaagtcacagatttcc
aaagctgcacagccagttctgacctcagtcaatgtggaatggcagcagtttgattcaaat
tcaccaataccagtacaggcacccagtcatattgtgtcattattcagtggttccagacaa
gtagtatatgggtttgtaccgcactgcacacaggcaacactgaaagctgaaatagatgac
cactttgtgtcaacaatggtctctactgcagatctcaatatcactgagggcaagattctt
caccagttgactgcacgtgccatcattagagactgggaagatgggacattggacatagat
cggactgagcatgaggtgaagaaaactgaacagaaagattacattatcaacattagtaaa
gagttctctattgtcacacagtttacaagttttgtggccattgaaaagagagaaaaggag
gaagatctcagcccacaaggtcccagcattgaagaattggttgctaaggaggatgttgac
atccttatgtatgtaggatgggaagaagggaagaaagataaagaaattaagctgagtgga
gaagaacagataaaacagttattggatggtgcaaaaaaagatgaaactctgtctaacatt
ctgaaagctgagaggagttaccagcaagcatacgaagtagcaactaaagagttatctgca
tctcatccactgagaatcttgtgtgacgtactgatagtgggtctcacagtggacttggtg
tgcttggagtgtgacatactggtagttggtctcacagtggacttggtgtgcttggagtgt
gacgtactggtagtgggtctcacaatggacttggtgtgcttggagtgtaagctggcacta
cctaaaacacctctaaatgcagacaggaaatag
DBGET
integrated database retrieval system