Saccoglossus kowalevskii (acorn worm): 100378787
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Entry
100378787 CDS
T04123
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03020
RNA polymerase
sko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100378787
09124 Replication and repair
03420 Nucleotide excision repair
100378787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sko03021
]
100378787
03400 DNA repair and recombination proteins [BR:
sko03400
]
100378787
Transcription machinery [BR:
sko03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100378787
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100378787
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
100378787
NCBI-ProteinID:
XP_002741050
LinkDB
All DBs
Position
Un
AA seq
275 aa
AA seq
DB search
MPYANQPSVRLSELSDDNVKFSVEDTDLSVANALRRVFIAEVATIAIDWIQIEANSSVLH
DEFISHRVGLIPLTSDEVVDRMQYSRDCTCDEFCPECSVDFMLDVKCTDDQTRHVTSRDL
MTSNPRVVPVTSRHRDDEAGDYGDNDDILIVKLRKGQELKLKAYGRKGFAKEHAKWNPTA
GVSFEYDPDNTFRHTVYPKPEEWPKSEYSELDDDQYQAPYDAMGKPNKFYLNVESCGALR
PENIVLSGLAVLKKKLSDLQTQHSHEMQSDVLTIT
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcaaatcagccatcagttcgtctttcagagctttctgacgacaacgtcaag
ttttcagtcgaagatacagacctcagtgttgccaatgcattgagacgtgtgttcattgct
gaagtagctactattgctattgattggattcagatagaagccaattcctctgtactacac
gatgagtttatatcacacagagtgggtcttattccacttacaagtgatgaagttgttgac
agaatgcaatactccagagattgtacctgtgatgaattctgtcctgaatgttcagttgat
ttcatgttagatgtcaaatgcacagatgatcaaacaaggcatgtaacaagtcgtgatcta
atgacaagtaatccaagagtggttccggtgacgtcacgacatagagatgatgaagctgga
gactatggagataatgacgatatacttattgtgaaactaagaaaaggccaggaactgaag
ttaaaagcatatggcaggaaaggttttgcaaaggaacatgccaagtggaatcctacagcg
ggtgtatcatttgagtacgatcctgacaatacatttcgtcatacagtgtatccgaagcca
gaggaatggccaaagagtgaatacagtgaattagatgatgatcagtaccaagcaccgtat
gatgctatggggaaaccaaacaagttttatttgaatgtggaatcctgtggtgcactaaga
ccagaaaacattgttctctctggtttggctgttctcaagaaaaagttgagtgatctccaa
acacagcacagtcatgagatgcaaagtgatgttcttaccattacataa
DBGET
integrated database retrieval system