KEGG   Saccoglossus kowalevskii (acorn worm): 100378787
Entry
100378787         CDS       T04123                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03020  RNA polymerase
sko03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100378787
  09124 Replication and repair
   03420 Nucleotide excision repair
    100378787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sko03021]
    100378787
   03400 DNA repair and recombination proteins [BR:sko03400]
    100378787
Transcription machinery [BR:sko03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     100378787
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100378787
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 100378787
NCBI-ProteinID: XP_002741050
LinkDB
Position
Un
AA seq 275 aa
MPYANQPSVRLSELSDDNVKFSVEDTDLSVANALRRVFIAEVATIAIDWIQIEANSSVLH
DEFISHRVGLIPLTSDEVVDRMQYSRDCTCDEFCPECSVDFMLDVKCTDDQTRHVTSRDL
MTSNPRVVPVTSRHRDDEAGDYGDNDDILIVKLRKGQELKLKAYGRKGFAKEHAKWNPTA
GVSFEYDPDNTFRHTVYPKPEEWPKSEYSELDDDQYQAPYDAMGKPNKFYLNVESCGALR
PENIVLSGLAVLKKKLSDLQTQHSHEMQSDVLTIT
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccatacgcaaatcagccatcagttcgtctttcagagctttctgacgacaacgtcaag
ttttcagtcgaagatacagacctcagtgttgccaatgcattgagacgtgtgttcattgct
gaagtagctactattgctattgattggattcagatagaagccaattcctctgtactacac
gatgagtttatatcacacagagtgggtcttattccacttacaagtgatgaagttgttgac
agaatgcaatactccagagattgtacctgtgatgaattctgtcctgaatgttcagttgat
ttcatgttagatgtcaaatgcacagatgatcaaacaaggcatgtaacaagtcgtgatcta
atgacaagtaatccaagagtggttccggtgacgtcacgacatagagatgatgaagctgga
gactatggagataatgacgatatacttattgtgaaactaagaaaaggccaggaactgaag
ttaaaagcatatggcaggaaaggttttgcaaaggaacatgccaagtggaatcctacagcg
ggtgtatcatttgagtacgatcctgacaatacatttcgtcatacagtgtatccgaagcca
gaggaatggccaaagagtgaatacagtgaattagatgatgatcagtaccaagcaccgtat
gatgctatggggaaaccaaacaagttttatttgaatgtggaatcctgtggtgcactaaga
ccagaaaacattgttctctctggtttggctgttctcaagaaaaagttgagtgatctccaa
acacagcacagtcatgagatgcaaagtgatgttcttaccattacataa

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