Saccoglossus kowalevskii (acorn worm): 102805174
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Entry
102805174 CDS
T04123
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102805174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sko03400
]
102805174
DNA repair and recombination proteins [BR:
sko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102805174
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
PWWP
MutS_II
MUM1-like_PWWP
Tautomerase
Motif
Other DBs
NCBI-GeneID:
102805174
NCBI-ProteinID:
XP_006822603
LinkDB
All DBs
Position
Un
AA seq
1151 aa
AA seq
DB search
MSKMNTLFSYFTKSPPASKTETSPTLGDLPNGKSKNSSPGEAANQTRGQPACKHKIGDIV
WTKLDGYPWWPGLVCSHPTQNVFFKGGKIHVQFVDETKSRAWIKEKNDKENIHDIDDDDI
GTRSSRKRPRKAALKVQKTKRRRIIEADSDEDNDDSEDEFKPESDVDSESDVSSGVDEDK
ISELDTESEPETPEKSLKRKRGSTRTPSAKPRKAEFSTPNSKSNTEQIFKTPTTVAASTK
ARLSMFTAPESPAPVSEDRQSFPHHSYEWLKEENRKDKKKRSMSDDNYDPSTIYVPESFL
QSCTPASRQWWEVKSNNFNSVLFFKMGKFYELYHMDAEISVKELGLIFMKGQVAHCGFPE
IAFGRYADTLIQRGYRVARIEQTETPDMMQERCRKLIKPTKFDKVVRRELCRISSKGTKT
YSFIDGDTCNAESSYLLSVTEKPCDGLNGGESLYGVCFVDTSIGKFHIGQFQDDRHCSRL
RTLIAHYTPVHVLYEKGKLLAKTQQILSQNLISALKDALHPGSEFWDSGKTLKFLAEKKY
FEKENKKEDVEEEDDDVNGKDYWPVGIRQMLSEMQVKVLKRYLKKCFLEEELLSMRNFEV
YKPLDDVKAVFDSKKSAIAFTTGRNRMVLDGVTLANLDVLENQTTGTTEGTLLERLDHCC
TPFGKRLFKEWLCAPLCNPVSINDSKRKIEDFLAALNGFKTACKIIKLFKGRTDEFKSKL
LKKTTTTAKRDSNDCGQFPDIQEELSFFDNAFDHGKAKSVGAIIPHAGVDPDYDCALEDI
NCTQKKLNHYLERQQQRLNCRTIVYFGTAKNRYQLEIPESVCKRVPDEFEVTSQKKGYKR
YTTDDIKALFNELVDAEGRRDTALTDTMRRVFAIFDEHYKLWDRTVQCLSVLDVLLSLAQ
YSQCSENDMCRPQIISPTQDMQPYISIVNGSHPCISKIFTGGDFIPNDTYIGCKDTDDDE
NIAGQCVLVTGPNMGGKSTLMRQVGLLVIMAQLGCHVPAESCKLTPVDRVFTRLGASDRI
MSGESTFYVELSETSSILQHASKHSLVLMDELGMFYCENAACMVENENEEDPSQETITFL
YKFVKGSCPKSYGLELLYGFQSNLVIKKGQNKAREFEDATDRLKIFRKLANIKKLSDLQS
SLQKLQEQLKI
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatgaataccctgttttcatatttcacaaagtctccgccagcatcgaagact
gaaacatcgcctactttaggtgacctgccaaatggaaaatcgaagaatagttctcctgga
gaggcagcgaatcaaacgagaggtcaaccagcttgtaaacataaaattggtgatattgtt
tggacaaaattagatggatatccatggtggcctggattagtttgtagccatccaacccaa
aatgtctttttcaaaggaggaaaaattcatgtgcaattcgtggatgaaaccaaaagtcga
gcatggataaaagaaaaaaatgataaggagaatatacatgatattgatgatgatgatatt
ggcactagatcatcaagaaagcgcccccgcaaggctgctcttaaagtacaaaaaacaaaa
aggagaagaattattgaagctgacagtgatgaagacaatgatgattcagaagatgaattc
aaacctgaaagtgacgttgactcagaatcagatgtgagcagtggtgttgatgaagacaag
atatctgaacttgacacggaatcagagccggaaactccagagaagtctcttaagcgaaaa
cgtgggtctacaaggacaccttctgctaagccaaggaaggcagagttttcgaccccaaat
agcaaatcaaatactgaacagattttcaaaacaccaacaactgttgctgcttctaccaaa
gcaaggctatccatgttcacagctcctgagtcaccagctccagtctcagaagacagacaa
tcatttccacaccattcatatgaatggctgaaagaagaaaatagaaaagataagaagaaa
cgctccatgagtgatgataattatgatccctctacgatttatgtacctgaaagttttctt
cagtcctgtactccagcttccaggcagtggtgggaagtaaaatccaataatttcaattct
gtattattttttaagatgggaaaattttatgaactttatcacatggatgctgaaatttca
gtcaaagaacttggtcttatctttatgaagggccaggttgctcattgtggtttcccagag
attgcgtttggtcgctatgccgacactctaattcagagaggttacagagtcgctagaatt
gaacagaccgagactccagatatgatgcaagaaaggtgtcgtaaattgatcaagcctact
aagtttgacaaagttgtgagaagagaattatgtcgcatttccagcaaaggtacaaagact
tacagttttattgatggtgatacatgtaatgctgaaagcagttatttgttatctgtgact
gagaaaccatgtgatggtctgaatggtggtgaaagtctctatggagtctgctttgttgat
acctccattggaaagtttcatattggacaatttcaagatgatagacattgttctagactg
cgtacactgatagcacactatactccagttcatgtgttgtatgaaaaaggaaaattactt
gctaaaacccagcagattctgagccagaaccttatctctgcattaaaagatgctttacat
ccaggttctgaattctgggatagcgggaaaacattaaaattcttggctgaaaaaaagtat
tttgaaaaagaaaacaagaaggaagatgttgaggaagaagatgatgatgtgaacggaaaa
gattattggcctgttgggattcgccaaatgttgtctgaaatgcaagtgaaagttttgaaa
aggtatttaaagaaatgtttcctagaggaggaattattgtcaatgaggaattttgaggtg
tataaacctttagatgatgtcaaagcagtttttgactcaaagaagtcagccattgctttt
actacaggaagaaatcgtatggtattggatggtgtgaccctggctaacttagacgtatta
gagaaccaaactacagggacaacagagggaactttgttagaaaggttggatcattgctgt
acaccttttggtaaaaggcttttcaaagagtggttatgtgcacccttatgtaatccagta
tccatcaatgacagtaaaaggaaaatagaagattttcttgcagctcttaatggatttaaa
actgcctgtaaaattataaaattattcaaaggacgaacagatgaattcaaatcaaaactt
ctcaaaaagaccactaccacagcaaaacgagacagtaatgactgtggtcaatttcctgat
atccaagaagagctttctttctttgataatgctttcgatcatggaaaagccaaaagtgtt
ggagcgatcattccgcatgctggggttgatccagattatgactgtgccttagaggatata
aattgcacacagaaaaaattaaatcattatttagagagacaacaacaacgactcaattgc
aggacaattgtatactttggcacagctaagaatcgctaccagctagagattcctgaaagt
gtctgcaaacgagtgcccgatgagtttgaagtcacatcacagaaaaaaggttataaacga
tacactacagatgatatcaaagctctgtttaatgagttagttgatgctgaaggcagacgt
gatactgccctcacagacacaatgaggagagtatttgctatatttgatgaacattacaaa
ctatgggatagaactgtgcagtgtttgtcagtgttggatgtcttattgtcactcgcacag
tacagtcaatgcagtgaaaatgatatgtgtagacctcaaataatctcaccaacgcaagac
atgcagccttatatctctattgtcaatggcagtcatccttgtatttctaaaatattcact
ggtggtgattttataccgaatgatacatatataggatgtaaggacactgatgacgatgaa
aacattgcaggtcaatgtgttttggtgactggtcctaatatgggtggtaaatccacactt
atgaggcaggttggattacttgtaataatggcacagttagggtgtcatgttccagctgag
agctgtaaactcacaccagttgacagagtatttactaggcttggtgccagtgataggatt
atgtcaggtgaaagtacattttatgtagagttgagcgaaacatcatccatactacagcat
gccagtaaacattcattggttctcatggatgaattaggtatgttttattgtgagaatgct
gcatgtatggtggaaaatgaaaacgaagaagatccaagccaagaaacaattaccttttta
tacaaatttgtgaaaggttcatgtcctaaaagttatggtctagaattactttatggattt
caatcaaacttggtaatcaaaaaaggacagaacaaagccagagagtttgaagacgctacc
gatagacttaagatcttcagaaaattagcaaacattaaaaaactatcagatctgcaatca
agtcttcagaaacttcaagaacaactcaagatctaa
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