Sphingomonas koreensis: BRX40_04540
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Entry
BRX40_04540 CDS
T04828
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
skr
Sphingomonas koreensis
Pathway
skr00906
Carotenoid biosynthesis
skr01100
Metabolic pathways
skr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
BRX40_04540
Enzymes [BR:
skr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
BRX40_04540
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Motif
Pfam:
Lycopene_cycl
NAD_binding_8
DAO
FAD_binding_2
NAD_binding_9
Trp_halogenase
FAD_oxidored
nec1
Motif
Other DBs
NCBI-ProteinID:
APR51797
UniProt:
A0A1L6J7I6
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Position
complement(908834..910006)
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AA seq
390 aa
AA seq
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MPAIHHCDLAIVGGGLAGGLLALALRKQRPDLNLRLIESGERLGGNHLWSFFASDIAPVD
RWLVAPLISYGWAGYDVTFPGHGRTLKAPYYAIESERFDRVVRAAMPPESVMTGRKVLGA
SARAVVLADGDRVEAGGVIDCRGPADLSKLDLGWQKFLGRELALADLHPLKRPIVMDATV
AQIDGYRFIYALPFAATRLFVEDTYYSDTPEIDADAMRQRIDTWLNARAIAVETVAREET
GVLPVAMGGDFEEYWHSGGNRVAKAGMRAGLFHPVTGYSLPDAVRLARAVAEASNLDGTA
LHELTHGYARRQWQRRGFYRMLSAMLFRAAEPEERYRILERFYRLDAGLIARFYAGQSSL
LDRARVLAGKPPVPIGRAWQAIRGMRGQAK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatccaccattgtgaccttgccatcgtcggcggcgggcttgccggcgggctg
cttgcccttgccctgcgcaagcagcgacccgacctcaatctgcggctgatcgagagcggc
gagcggctgggcggcaaccatctctggtccttcttcgccagcgacatcgccccggtcgac
cgctggctggtcgcgccgctcatctcctacggctgggccggttacgacgtcacctttccc
ggccatgggcgtacgctgaaggcgccctattacgccatcgaatccgagcggttcgaccgg
gtcgtgcgcgcggcgatgccgcccgaaagcgtgatgaccggccgcaaggtgctgggcgcc
agcgcgcgcgcggtggtgctggcggacggcgaccgggtcgaggcgggcggcgtgatcgac
tgccgcggccccgccgatctgtccaagctcgaccttggctggcagaagttcctcggccgc
gagctggcgctggccgatctgcacccgctgaagcgcccgatcgtgatggacgcgacggtc
gcgcagatcgacggctatcgctttatctatgcgctgccctttgccgcgacgcggctgttc
gtcgaggacacctattacagcgacacgccggagatcgacgcggacgcgatgcgccagcgg
atcgacacctggctgaacgcgcgcgcaatcgcggtcgagacggtggcgcgcgaggaaacc
ggggtgctgccggtggcgatgggcggcgatttcgaggaatattggcattcggggggcaac
cgcgtcgccaaggcggggatgcgcgccgggctgttccatccggtcaccggctattcgctg
cccgatgcggtgcggctggcgcgcgcggttgccgaagcgagcaatctcgacggcaccgcg
ctgcacgagttgacccatggctatgcccggcgccagtggcaacggcgcggattctaccgc
atgctctccgccatgctgttccgcgcggccgagcccgaagagcgttatcgcatcctcgaa
cgcttctatcgactggacgcggggctgatcgcacgcttctatgcaggtcagtcgagcctg
ctggatcgcgcacgggtgctggcgggcaagccgccggtaccgatcgggcgcgcctggcag
gcgatccgtggaatgaggggccaggccaagtga
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