Skermanella sp. TT6: IGS68_21050
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Entry
IGS68_21050 CDS
T07020
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skt03016
]
IGS68_21050 (mnmC)
Enzymes [BR:
skt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
IGS68_21050 (mnmC)
Transfer RNA biogenesis [BR:
skt03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
IGS68_21050 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Pyr_redox_2
Pyr_redox
GIDA
FAD_binding_2
FAD_oxidored
FAD_binding_3
NAD_binding_9
AlaDh_PNT_C
HI0933_like
3HCDH_N
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
QQP88501
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Position
4519011..4520273
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AA seq
420 aa
AA seq
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MTGVPPWFRPPRPAAAPGRALVVGGGIAGAAAASALARRGWRVTLAERHGRIAPEASGNP
AGIHMPRLVAGRSPERTFHAEAYLHGLRELARLGPAVDRSACGVLQLATDDRQAERHEAA
LRAPVLPAGMVRAVGPGEASELAGIPVRYGALWFPEAGWVDPASFARALLDGTASVRLDT
GIAELAHDGRLWHATGADGTALEPADAVVLANGLDARAFPRSAWLPLSPRRGQITVVPAT
PRSAPLRCVISHGGYILPARRGGHLVGATFDWVGDRVPAPAQEPDSADDARNLAEADVLF
PGLFEGAETPKGRASLRAMTADHLPLVGPVVDRDRFVDDFAGLRQGRPERSFPGAVHHPG
LWVMAGLGARGLVTAPLAGELLAAQICGGPWPVAADPAGVLMAALHPARFLVRDLKRRHV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagttccaccctggttcaggcctccgcgcccggcagcggcgcccggccgggcg
ctggtggtgggaggcggcatcgccggcgcggcggccgcctcggcgctggcacggcgtggg
tggcgggtcacgctggcggaacggcacggccggatcgccccggaagcgtcgggcaacccg
gccggcatccatatgccgcggctggtcgccggccgctcgcccgaacggacgttccatgcg
gaagcctatctccacggccttcgcgagttggcaaggctggggccggcggtcgaccgctcc
gcctgcggagtgctccagctcgccacggacgaccggcaggccgaacgccatgaagcggcg
ttgcgggcaccggtcctgcctgcgggcatggtgcgggcggtcggacccggcgaggcgagc
gagcttgccggcataccggtccggtacggcgcgctgtggtttcccgaggccggctgggtc
gatccggcctccttcgcgcgggcgctgctcgacgggaccgcctccgtacggctggacacc
gggatagcggaactcgcccatgacggacgcctctggcacgcgacgggcgccgacggcacc
gccctggagcccgccgacgcggtggtgctggcgaacggcctggatgcccgcgccttcccg
cgatccgcctggctgcccctgtcgccgcgccgaggccagatcaccgtcgtgccggccacc
ccgcgcagcgcccccctgcgctgcgtgatcagccacggcggctatatcctccccgcgcgg
cgaggcgggcatctggtcggagccaccttcgactgggtcggggaccgggtaccggcgccg
gcccaggaaccggactccgccgacgacgcccgcaacctcgcggaagccgacgtcctgttt
cccgggctgttcgagggggcggagacgccgaagggccgggcctcgctgcgggccatgacc
gccgaccatcttccgctggtcggcccggtggtggaccgggaccgcttcgtcgatgatttc
gccggcctgagacagggacgcccggagcggagctttcccggcgcggtgcatcatcccggc
ctctgggtcatggcgggactcggggcccgcggactggtcaccgcccctttggcaggcgaa
ttgctggcggcgcagatctgcggcggcccctggcctgtcgcggccgacccggcgggtgtc
ctcatggcggcactccatccggcgcgtttcctggtgcgcgacctcaaaaggcgtcatgtg
taa
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