Skermanella sp. TT6: IGS68_32380
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Entry
IGS68_32380 CDS
T07020
Symbol
gcl
Name
(GenBank) glyoxylate carboligase
KO
K01608
tartronate-semialdehyde synthase [EC:
4.1.1.47
]
Organism
skt
Skermanella sp. TT6
Pathway
skt00630
Glyoxylate and dicarboxylate metabolism
skt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IGS68_32380 (gcl)
Enzymes [BR:
skt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.47 tartronate-semialdehyde synthase
IGS68_32380 (gcl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
QQP93712
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Position
pTT6-2:196650..198419
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AA seq
589 aa
AA seq
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MPRMTAIEAAVHVLEKEGVTICFGVPGAAINPFYSALRHNGRIDHILARHVEGASHMAEG
YTRAEAGNIGICVGTSGPAGTDMITGLYSAQADSIPILCITGQAPRARLHKEDFQAIDIA
SIAKPVTKWATTVLEPAQVPYVFQQAFHTMRSGRPGPVLIDLPLDVQLAEIEFDIDTYEP
LKPYKPAATRQQIEKALAMLDASERPLIVAGGGVINADASAQLVELAEITGVPVIPTLMG
WGTIPDDHPLMAGMVGLQTSHRYGNATMLKSDFVLGIGNRWANRHTGSVATYTKDRKFVH
VDIEPTQIGRVFAPDFGIVSDAGAALDLFVEVAREMKAAGRLKDRSAWAAECLTRKRTMH
RRTDYDNVPIKPQRVYQEMNQAFGEDTCYISTIGLSQIAGAQFLHVYKPRHWINCGQAGP
LGWTLPAALGVRAADRKRRIVALSGDYDFQFLIEELAVGAQFKLPYIHVVVNNSYLGLIR
QAQRGFQMDFQVQLSFENVNAPELNGYGVDHVAVAEGFGCKAIRVTDPNEIQAAFAQADA
LMEEFQVPVVVEIILERVTNIAMGTEIDNVMEFEEVLDLPEEQPTRVLV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatgacggctatcgaagctgcggttcatgtgctggagaaggagggcgtcacg
atctgtttcggcgttcccggcgcggccatcaacccgttctactccgcccttcggcacaat
ggcaggatcgaccatatccttgcgcgccatgtcgagggcgcctcgcacatggccgagggc
tacacccgcgccgaagccggaaacatcgggatctgcgtcgggacctcgggtccggcaggc
accgacatgatcaccggcctttactccgcccaggccgacagcatcccgatcctgtgcatc
accgggcaggcgccgcgcgcccggctgcacaaggaggatttccaggcgatcgacatcgcg
agcatcgccaagcccgtgaccaaatgggcgacgaccgtgctggagccggcccaggtgccc
tacgtcttccagcaggcgttccacaccatgcgctccggccggcccggcccggtgctgatc
gacctgccgctcgacgtgcagctggcggagatcgagttcgacatcgacacctacgagccg
ctgaagccctacaagccggccgcgacccgccagcagatcgagaaggcgctggcgatgctg
gacgcgtcggagcgtccgctgatcgtcgcgggcggcggcgtcatcaacgccgacgcgtcg
gcgcagctggtcgagctggccgagatcaccggcgtgccggtcatcccgaccctgatgggc
tggggcacgatccccgacgaccatcccctgatggccggcatggtgggattgcagacctcg
caccgctacggcaacgccacgatgctgaagtccgacttcgtgctggggatcggcaaccgc
tgggccaaccgccacaccggttcggtcgcgacctacacgaaggaccgcaagttcgtccat
gtggacatcgagccgacccagatcggccgggtgttcgcgccggacttcggcatcgtgtcc
gacgccggcgccgccctggacctgttcgtcgaggtggcgcgcgagatgaaggccgcgggc
aggctgaaggaccgctccgcctgggccgcggagtgcctgacccgcaagcggaccatgcac
cggcgcaccgactacgacaacgtgccgatcaagccgcagcgcgtctatcaggagatgaac
caggccttcggcgaggacacctgctatatcagcacgatcgggctgtcgcagatcgccggc
gcccagttcctccacgtctacaagccgcgccactggatcaattgcggccaggccggcccg
ctgggctggaccctgccggcggcgctcggcgtccgggcggccgaccgcaagcggcggatc
gtggccctgtcgggcgactacgacttccagttcctgatcgaggagctggcggtcggcgcc
cagttcaagctgccctatatccacgtggtcgtgaacaactcctacctggggctgatccgg
caggcccagcgcggcttccagatggatttccaggtccagctctcgttcgagaacgtcaac
gcgcccgagctgaacggctacggcgtggaccatgtggcggtcgccgaaggcttcggctgc
aaggcgatccgggtgaccgacccgaacgagatccaggccgccttcgcccaggccgacgcc
ctgatggaggagttccaggtcccggtcgtggtcgagatcatcctggagcgggtgaccaac
atcgcgatgggcaccgagatcgacaacgtgatggagttcgaggaggtcctcgaccttccg
gaggagcagccgacccgcgtgctggtctga
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