Serpula lacrymans: SERLADRAFT_372905
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Entry
SERLADRAFT_372905 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
sla
Serpula lacrymans
Pathway
sla03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SERLADRAFT_372905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sla03019
]
SERLADRAFT_372905
Enzymes [BR:
sla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
SERLADRAFT_372905
Messenger RNA biogenesis [BR:
sla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
SERLADRAFT_372905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
SRPRB
AAA_16
Motif
Other DBs
NCBI-GeneID:
18810454
NCBI-ProteinID:
XP_007322059
JGI:
372905
UniProt:
F8P6N6
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MHSNALHNTKEWVLEPETEYRFELDPGTSLAIKLLDGQAEIFGAELVEGIAYLFGFECKA
AIYTWQGCTLEISNASTEYISEETPMSAYANVHIAFEQMRVRALRALHGSPASDDDPSAN
ADPPRVLVLGPENSGKTSVCKILTNYAVRAGQNWSPLLVSVDPSEGGWSAPGAISAAPVS
SPIPTASPANPLGSAATSAPTALPSNALLPLVYWYGHADIKRNPTLLDRVIRNLGENIGE
RFYNDVEGRTSGLIIDTPSSFSSSANTGTSTENRHTLIKACVDAFRINVILIVGHEKLNV
EMQRLYGSRLAVVKIPKSGGVVELDHSYRERVQKHQLHTYMYGQVIDPPPGIPSGMVDGE
MTADLVLSPSSTVLSFDDLTIYRVGQETMAPSSALPIGAARTVSEMQPILVDPSSPSSGL
LNAVLALLAPPNPDESERYDEEILDLHVIGFLIITSLDIPNRKMTILSPTQGSLTGRTAV
VGSFEWQE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcattctaatgctttgcacaatacaaaggagtgggtcctagaacccgagacagagtac
agattcgaactcgatcccggaacatctctagccatcaagctcttggatggacaggcagaa
atatttggcgctgaactcgtagaaggcatcgcctacctttttggtttcgagtgtaaagcg
gccatatacacatggcaaggatgcacgctagagataagcaatgcctccaccgagtatatc
tcagaggagacgcccatgtcggcctacgcaaatgtccacatcgcattcgagcagatgcgc
gtccgtgcactccgcgctctccacggatcccccgcttccgacgacgaccccagcgccaac
gcagaccctccccgagtcctcgtcctaggcccagaaaactctggaaaaacaagcgtatgc
aagatcctaaccaactacgcagtccgcgcaggccagaactggtcgcccttacttgtcagc
gtcgacccaagcgagggaggctggtcagctccaggcgccatctcagccgctcccgtctca
agccccatcccgactgcctcacccgcaaaccccctaggctcagcagccacttcagctccc
accgcactcccctccaacgctctcctccctctcgtctactggtacggtcacgccgatatc
aagagaaatccaacgctcctagaccgtgtcatccgcaaccttggagaaaatatcggcgaa
aggttttataatgacgtcgaaggacgcacatctggcctcatcatcgatacaccttcatcc
ttcagctcaagcgcaaacacgggaaccagcacagagaaccgacatactcttatcaaagcc
tgtgtagacgcattcagaatcaacgtcatcctcatcgtcggccacgaaaaactcaacgtc
gaaatgcaacggctttacgggagccgtctcgcagtagttaaaatcccaaaatcaggaggc
gtcgtcgaactagaccacagctaccgcgaacgcgtgcaaaagcaccagctccacacctac
atgtacggccaagtcatcgacccccctccagggatcccatcaggcatggtagacggcgaa
atgaccgccgacctcgtcctctctccctcctcaaccgtcctcagcttcgacgacctcacg
atctaccgcgtcggccaagaaacgatggctccctcttcggccctccccatcggtgcagcg
cgtacagtctcagagatgcaacccatcctcgtcgacccatcctcacccagctcaggtctg
ctcaacgcagtcctcgccctcctcgcccctcccaaccccgacgaatccgagcgctacgac
gaagaaatcctagacctgcatgtcatcgggttccttatcattacgagccttgacatccct
aatcgcaagatgacgatcctctcaccgacacaagggtcgctgacagggcggacggccgtc
gtcgggtctttcgagtggcaggagtag
DBGET
integrated database retrieval system