Serpula lacrymans: SERLADRAFT_446372
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Entry
SERLADRAFT_446372 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sla
Serpula lacrymans
Pathway
sla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERLADRAFT_446372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_446372
Enzymes [BR:
sla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SERLADRAFT_446372
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SERLADRAFT_446372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
18816276
NCBI-ProteinID:
XP_007315238
JGI:
446372
UniProt:
F8NP63
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MKETVSLQAPKVIKKLQFSLLNAQDTVKISEFQVTHRDLYTPTDRLPVKDGVLDRRLGTT
EKNTFCETCGLSSVDCVGHYAYIKLVVPVFHIGYFKHTIGILQCVCKTCARVLLEEPDRR
VYLKRFRRPNLENIQRQSLSKAVNTMSRKCVYCPYCSATNGAVKKAGALKIIHDKFRAKK
TAEEMEKWKRTFAPAVEAQKELGMYLNKAVHEDLNPLKVLDLFKRISDEDCELLGLRPAH
GRPEEYIWQYISVPPVCIRPSVAQDGASNEDDLTVKLTEIVFTNALIKQGLSKGAPTAQF
MEHWEFLQLSVAMYINSELPGVPSQPGQKPMRGFVQRLKGKQGRFRGNLSGKRVDFSGRT
VISPDPNLRIDEVAVPERVAKVLTYPERVTPHNIEGLKQAVRNGCDVHPGANYVTAGSSG
FKKFLKFGNRNAVADTLRVGDTVERHIINGDIVLFNRQPSLHKLSIMCHRVKIRPWRSFR
LNECVCGPYNADFDGDEMNLHVPQTEEARTEALELMSVKHNLVTPRNGEPVIAAIQDFIT
ASYLISRKDTFFDRRSFTQICCYFADADMQIDIPPPAIWKPVRLWTGKQIFNVLMRPNKD
SKVFVNVESKCNKPQEPKAEFYPRMKPAPDLSPNDGWLVIVNSEIMCGVMDKATVGSGKK
KSIFGVIMRDYGPHEAAAAMNRLAKLCARWLANFGFSLGINDVIPGPILAAKKDELVEKA
YADCLDLIAQAKKGKLENKPGCNQEQTLEALISSVLSKVRDAVGEICMKELSRHNAPLIM
ATCGSKGSVINVSQMVACVGQQIIAGHRVPDGFQDRSLPHFPKKSKEPPSKGFVRNSFYS
GLRATEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLTTQYDLSVRNSTGGVVQF
TYGDDGLDPACLEGDAQPIEFERAWSHALSIGNRRGRSLLPYEVLEIVDQELSTKRFTTE
CTAAYLATIRGYITDNVAHTLATMRQSRGMFDALERAAEWDADTDLSLGASDADKAIVDN
KSKVTEDQLRCFLELCWVKYVKARIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMN
VTLGVPRIKEIINAAKAISTPIISCKLVTSDSEASARIVKGRLEKTHLGDVASVLEEAWA
PEYTYIGVIVDVDAIQKLQLELTLDDIKWGIVAAKKLKIKQESITVLPRKNRLRIYIDGQ
DKYYRLRELKRLLPDVVVKGVPTIQRAIINIKEKDDAKGKKGDKELLVEGYGLQKVMVTE
GIVGEHTSSNHVIEVAQVLGIEAARRTIINEIQYTMQSHGMSIDPRHVMLLGDVMSYKGE
VLGITRFGVAKMKDSVLMLASFEKTTDHLFDAAAFGKNDSIAGVSESIIMGNPAANCGTS
MPALFSPAPIITKPRKLLFEGAL
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaactgtatctctccaagcacctaaagtcataaagaagctccagttcagtctt
ctaaatgcccaggatacagtgaaaatatcagaatttcaagtcactcatcgtgatctttac
acccctacggaccggctgccagtcaaagacggagttctagatcgacgattggggacaacg
gagaaaaacactttctgcgaaacatgtggtctctcatcggtcgactgtgtgggccattat
gcatatatcaaacttgtggtccctgtatttcatatcggatacttcaaacacacaataggt
atccttcagtgtgtctgcaagacttgtgctcgtgtacttttagaagaacctgaccgacgt
gtatatctcaagcgttttagaagacccaatttagagaatattcagcgccagtctctctcc
aaagctgtcaatactatgtcaaggaaatgtgtctactgtccttactgctctgccacaaat
ggtgctgtcaagaaagcaggagcattaaagatcattcatgacaagtttcgggcgaagaag
acagcagaagagatggaaaagtggaagcgtacatttgctcctgctgtagaagcgcaaaag
gaactaggaatgtatctcaacaaagccgttcacgaagatttgaatccattaaaagttctg
gatcttttcaaaagaatttccgacgaggactgcgaactgttaggtctccgtcctgctcat
ggccgaccagaggagtacatttggcagtatatctcagttccacctgtttgtattaggccg
tccgtagcccaggatggtgcctccaacgaagatgatctcactgtaaaactcactgaaata
gtgttcaccaatgctctcattaaacagggcctatcaaaaggtgcgccgaccgcgcaattt
atggaacactgggaattccttcaactctctgtcgctatgtatatcaactctgaattacct
ggtgtaccatctcaaccaggtcaaaagcctatgagaggttttgttcaacggctaaaaggg
aagcagggtcgatttcgtggtaacctttcaggaaagcgtgtcgatttctccggccgtacc
gtcatatctcccgatcctaacctacgtatcgacgaagtagctgttcctgaaagggtagcc
aaagtactcacgtatccggaacgtgtgacgccccacaatattgaggggcttaaacaggct
gtcaggaatggttgtgacgtccatccaggggcaaattatgttactgctgggagcagtggg
ttcaagaaatttttgaaatttggtaaccggaatgctgttgcggatactcttcgagttggt
gacactgttgaacgacatatcatcaatggcgatattgttcttttcaatcgacaacccagt
ttgcacaagctctctattatgtgtcatagggtaaagattcgtccttggcgatcattccgt
ttgaacgaatgtgtctgtggtccgtacaatgctgattttgatggtgacgaaatgaatttg
cacgttccccagacggaggaagcaaggacagaagcattggaactgatgagtgtcaaacac
aatcttgtcactcctcgaaatggtgaacctgttattgctgccatccaagacttcataacc
gcatcctacttgatatcacgcaaagacacgttctttgatcgccgctcgttcacgcagatt
tgctgctacttcgcggatgctgatatgcaaattgatatcccacctccagcaatctggaaa
cccgtcaggttatggacaggaaaacagatcttcaacgtcctaatgcgtcctaacaaggat
tcgaaggtctttgtcaacgttgaatccaagtgcaacaaaccacaagagccaaaggctgag
ttttatcctcgcatgaagcccgctcccgacctgtctcccaatgatggttggctggttatt
gtcaacagtgagatcatgtgtggtgtcatggataaagctacagtaggaagtggcaaaaag
aagtccatttttggtgttattatgagagactatggccctcatgaggcagcagcagcgatg
aaccgtttggcaaagctctgtgctcgttggcttgcgaactttgggttctccctgggtatc
aatgatgtcattcctggaccaatccttgcagcgaaaaaagatgagcttgttgagaaggca
tatgctgactgtttagacctaatcgcccaagccaagaaaggaaagttggaaaacaagcca
ggttgcaaccaggagcaaacactagaagcactcatatcctctgttctgtctaaagtccgt
gatgctgtaggagaaatttgtatgaaggaacttagtcgacacaatgcaccacttatcatg
gcgacatgtggttcgaaaggttccgtcatcaacgtttctcagatggtggcttgtgtcggc
caacaaatcatcgctggacatcgtgttcctgatggtttccaagatcgttccttgccacat
tttccaaagaaatcaaaagagccaccttctaaaggatttgttcgcaatagtttctacagt
ggtctaagagcaacagaattcctgtttcacgctatctccggtcgtgaaggtcttgtagat
accgctgtgaagactgctgaaacgggttacatgcaacggcgtctcatgaaagctctggaa
gacttaacgactcaatacgacctttcagtaagaaattccactggtggtgtagtacagttc
acgtacggtgacgatgggcttgaccccgcctgtctcgaaggtgacgcccagcctatagag
ttcgaaagagcatggagtcacgctttgtccatcggtaacagaagaggacgaagccttcta
ccttacgaagttctcgaaatcgtggatcaggaactctctactaagaggtttaccactgag
tgcacagccgcttatttagctactattcgtgggtacataacggataatgttgcgcacacg
cttgcgacaatgcgacaaagtcgaggaatgtttgacgcattggaacgcgcagctgaatgg
gatgctgatacagacttatctcttggagcatcagatgccgacaaagccatagttgacaac
aaatccaaggttacagaagatcagcttcgttgtttcttggagttgtgttgggtcaaatac
gtaaaagccagaattgagccaggttccactgttggtgctgtgggcgctcaatctatcggt
gagcctggtactcagatgacattgaagactttccattttgctggtgtcgcatccatgaac
gtgactttgggagtcccacgtattaaagaaatcatcaatgctgccaaagcgattagtacg
ccgattatcagttgtaaactcgtgaccagtgatagcgaggcttcggctcgtattgtcaag
ggtcgccttgaaaagacccatcttggtgatgttgcttctgtgcttgaggaagcatgggca
ccagagtacacttatattggtgtcatcgtggacgtagatgctattcagaaactccagctc
gagttgactttagatgatatcaaatggggtatcgttgctgccaagaaactaaagataaag
caagagtctataactgtccttccgcggaaaaaccgcttgcgtatttacatcgacggccaa
gataaatattatcgcctcagggaactcaagaggctattacctgatgtcgttgttaagggt
gtgccaacaatacaacgtgctatcatcaacatcaaagagaaggatgatgccaaaggaaag
aagggtgacaaggaacttttagtagaagggtatggactacaaaaagttatggtgacagaa
ggaattgttggcgaacatacatcttctaatcacgttatcgaagttgcgcaggtgctgggc
attgaagcggcacgccgaaccatcatcaatgaaattcaatatacgatgcaaagtcacggt
atgagcatagatccacgtcatgtcatgttactcggagatgtcatgagttataagggcgaa
gttttaggaattactcgctttggtgtggcaaaaatgaaagatagcgtcctcatgttggca
tccttcgaaaaaactacagatcatctctttgatgccgcagcctttggaaaaaacgacagc
attgcaggggtttcggagagtatcattatgggtaatccggctgctaattgtggaacatca
atgcctgcactgttctcacctgctccaataataaccaaaccgagaaagcttctcttcgag
ggtgccctatga
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integrated database retrieval system