Serpula lacrymans: SERLADRAFT_447311
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Entry
SERLADRAFT_447311 CDS
T03135
Name
(RefSeq) hypothetical protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sla
Serpula lacrymans
Pathway
sla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERLADRAFT_447311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sla03021
]
SERLADRAFT_447311
Enzymes [BR:
sla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SERLADRAFT_447311
Transcription machinery [BR:
sla03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
SERLADRAFT_447311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
18816362
NCBI-ProteinID:
XP_007316199
JGI:
447311
UniProt:
F8NP09
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MPDGSERTKRTPTFNTLAREESFRNPSKTGSTYPILNEFVTPHIESFNALFDDSGLPKGD
GDGRGLLSLGLKDIGERVVFDGTGVVGSESGPSGWGNRLSFWIEEVSIAKPQVPERDTLS
TERRVYPSEARERLTSYRGRMQAKVCWKLNNDTHPNQHVMRDCGLVPVMVRSVRCNLRSL
SSAELVQHNEEPEEFGGYFIINGNERLIRYLILPRRNHVISLIRPSFSNRGPSYTQYAVQ
IRCVRPDQSSATNSLHYLSNGSATLRFSWRKQEYVIPIMLILKALVGASDKEIFEGVMMQ
DYDNTFLTDRVELLLRSFKMYNLYTGDQCLEYLGDKFRVVLGMPEDWTNQALGVWLIQKM
ILVHLETPREKFRMLLFMLRKLYAVVSSSCCSDNPDSPQHQEVLLPGSLYGMIIKERLEE
ALNQVRNQIATDVRRAEPPPDFLDKRYITKIINRVNWDIGAKMSNFLATGNLTSPSGLDL
QQASGFTIVAEKLNWQRYISHFRCIHRGAFFAELKTTTVRKLLPEAWGFLCPVHTPDGSP
CGLLNHLSRTCRIVTSPLAVAHIPALLVGHGMTRAFSSSIDGRRNLCVQLDGRVIGWAKP
AVARQLANHLRTWKTEGRHKVPLDLEIGYVPESKGGQYPGLFLFSSRARMMRPVKYLANG
KDDQIGPFEQVYMNIAVKPEEIEEGVSSHVEHAPTNFLSILANLTPFSDFNQSPRNIYQC
QMGKQTMGTPSTALKHRTDNKLYKLQTGQSPVVRPRLHNTYAMDSFPNGTNAIVAVISYT
GYDMEDAMILNKSAHERGFGYGTVYKSQIVDLKDMRGASKSTTAPTLHFGLGDDIRTEEG
SRQHACCHFLDRDGLPYIGTKLDSGDPIAAYVDDTTGRTKFVKYKGDEQALVDEVRLLGG
DAGDTELQKLHITLRITRSPVIGDKFSSRHGQKGVCSQKWPAVDMPFTESGMQPDVIINP
HAFPSRMTIGMLVESMAGKAGAMHGLAQDATPFQFSEEDTAVDYFGEQLLAAGYNYYGNE
PMYSGITGKEFAADIYIGVVYYQRLRHMVLDKFQVRTTGPVDPVTHQPVKGRKRAGGIRF
GEMERDALIAHGTSFLLQDRLMNCSDYSTAWVCRTCGSLISLGYDDISLGEMSVGSSGGI
RSTGPGGEYCRVCRATAEEEEDRARQALATGQNPRHGTHSDITVAISSQNVLGRSTKGGD
LDVVAVPYVFRYLCAELASMGIAISLEVR
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgccagacggttcagagcgcacgaaaagaacgccaacgttcaatacactagcaagagag
gagtcattcagaaatccctcgaaaacaggatccacctatcccatcctcaacgaattcgtt
accccccacatcgaatctttcaatgctctcttcgacgattcaggactgccaaaaggcgac
ggcgacggtcggggtcttctttctcttggactgaaagacataggcgaacgcgtcgttttt
gatggaactggggtggtgggatcagaaagcggtcccagtggctggggaaacagattgagc
ttttggatcgaggaagtatcgatcgcgaaacctcaggtgccggagagagatacgctcagt
acagaaaggagggtatatccttctgaggcgcgggagcgtttgacatcttatcgagggcgt
atgcaggccaaagtttgctggaaactgaacaatgacacccatcccaatcaacacgtaatg
agagactgcggtcttgtgccagtaatggttcgatcggtcagatgcaaccttcgatctctt
tcctccgcagaactcgtccaacacaatgaggaacccgaggagtttggagggtatttcatc
atcaacgggaatgagcgattaatacgctatctcatcctccctagacgcaatcacgtcatc
tctctcatccgtccctcatttagtaatcgtggaccttcatatactcagtatgcagttcaa
attagatgtgttcgtcccgaccagtcaagtgccaccaacagcctgcattacctctcgaac
ggcagtgcgacacttcgattcagctggcgaaaacaagaatatgttattcccatcatgctt
attctcaaggctcttgttggagcatctgacaaagaaatctttgaaggcgtcatgatgcag
gattacgacaacacattcctgactgatcgagtcgaactgttattacgcagtttcaagatg
tacaatctctacacgggggatcaatgtcttgagtatctcggtgacaaattccgcgttgta
ttgggcatgccagaagactggacaaaccaagcattgggtgtctggctgattcaaaagatg
attcttgtccatttggaaacaccacgagaaaaatttcgcatgctactatttatgctgcgg
aagctttatgcagtggtatcctcctcttgttgctccgacaaccccgactcgccgcaacat
caggaggttctgcttcccggatccttgtatggaatgatcatcaaggagcgtttggaagaa
gccttgaaccaagtgaggaaccagattgctacagatgtgcgaagggcagagcccccaccg
gactttttggataaacgctacatcactaaaattattaacagagtcaactgggatattggg
gcaaaaatgtccaacttcttggccactggcaatctcacatcaccttcgggtctcgattta
caacaggcgtctgggtttacgattgtagcagagaaacttaactggcaacggtatatcagt
catttcaggtgtatacatcgtggtgctttcttcgcagaactgaaaaccaccaccgttcgt
aaactgcttcctgaagcatggggtttcctctgtccggtccatacgcccgatgggtctccg
tgtggtctgctaaatcatctttcacgaacatgtcgcattgttacttcgcccctagcggtt
gctcacatacctgctctcctggtgggccatgggatgacacgagccttctcatcatcaata
gatggcagaagaaatttatgtgttcagctcgatgggcgtgtgataggttgggcgaaacct
gcagttgctcgacagctcgccaaccatcttcgcacgtggaaaacggaagggaggcacaaa
gtaccacttgatctagagatagggtatgtccccgagtcaaaggggggccagtacccagga
ctcttcctgttctccagtcgtgcaagaatgatgcgtccagtgaagtatctggcgaatgga
aaggatgatcagatcggccctttcgagcaagtgtatatgaatatcgctgtaaagccggag
gagattgaggaaggcgtatcatcacacgtagaacatgccccaacgaacttcttgtctatc
cttgcgaacctcacgccattttctgattttaatcagagtccgcgaaatatctatcagtgt
cagatgggtaaacaaacgatggggacgccatcaacagctctcaaacaccggacagataat
aagctgtacaaactacaaacaggacaaagccctgttgttcgaccgcgactacataacact
tatgccatggattctttccctaatggcaccaacgcaattgtcgccgtcatttcttacact
ggctatgacatggaagatgccatgatccttaataaatcggcccatgagcgcgggtttggt
tacggcactgtgtacaagtcacagattgttgacctcaaggatatgcgaggagcttccaag
tcgacaactgccccaaccctgcattttggtcttggtgacgacatccgcacagaagaagga
agtcgtcaacatgcctgctgccacttcctggaccgggatggtttaccttatatagggact
aaactagattccggcgatccaatcgctgcgtatgttgacgacactaccggtcgtactaag
tttgtcaagtacaagggtgatgagcaagctctcgtggacgaagttcgtctgttaggtggc
gacgcaggtgatactgaactacaaaaacttcatataacattaaggatcactcggtctcct
gttattggcgacaaattctcatcgcgccacggacagaaaggtgtttgttcgcagaaatgg
ccagcagtcgacatgccgttcacagagagcgggatgcaacctgatgttatcatcaacccg
catgctttcccaagtcgtatgaccatcggcatgttggtagagagtatggcaggaaaagct
ggcgccatgcacggcttagctcaagatgccacacctttccaattctctgaggaagatact
gctgtcgattatttcggagagcaactacttgctgcaggttataactactacggtaacgag
cctatgtattccggcataactggcaaagagttcgctgccgacatctacatcggtgttgtc
tactaccagagattgcgacacatggtgttagacaaattccaagtgcgaacaacaggcccg
gtggatcctgtcacccaccagccagtaaagggtcgtaagcgcgcaggtggtatccgtttt
ggagaaatggagcgtgatgctcttattgcccacggaacctcgttcctattacaagaccgt
ctgatgaattgctccgattactcgacagcatgggtctgccgtacctgtggtagtctgata
tctctcggctacgacgatatcagcttaggtgaaatgtctgttggctcatctggagggata
cgatcgactggcccaggtggcgaatactgcagagtttgtcgtgctaccgcagaggaggaa
gaggaccgcgctcgtcaagcattggcgactggccaaaatcctcgacatggcacccattcc
gacattactgtcgctatcagttctcaaaatgtattaggacggtcaacaaagggtggggat
ctggatgtggtcgcagttccttacgttttccgttatctctgtgctgagttggcttcgatg
ggtatcgccatttcgctagaagttcgttga
DBGET
integrated database retrieval system