Seriola lalandi dorsalis (Yellowtail amberjack): 111655361
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Entry
111655361 CDS
T06058
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03020
RNA polymerase
slal04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111655361 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
111655361 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111655361 (polr3b)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111655361 (polr3b)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111655361 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111655361
NCBI-ProteinID:
XP_023262483
Ensembl:
ENSSLDG00000022853
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MEVLGGEFCSMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHHKLVNTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKK
GQPMVKNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHSILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSTQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgctgggaggagagttttgttccatgactccgcaggagttggcggctcctgtc
aacactgtggcggaaaaatggaaactattaccagccttcctgaaggtgaaaggtctggtg
aagcagcacatcgactcattcaactatttcatcaatgtggagataaagaaaataatgaaa
gctaatgaaaaaatcacaagcgatgctgatccaatgtggtacctcaaatacctcaatatc
tatgttggcatgcctgatgttgaagaaagcttcaacgtaactagaccagtatcgcctcat
gagtgtcgtctcagagacatgacctactcagcgcccatcacagtggacatagagtacact
cgcggcagtcagagaatcatccgcaatgccctgccgattggacggatgccgatcatgctg
cgaagctcaaactgtgttcttacaggaaagacacccatggagttttcaaaactcaatgaa
tgtcctctggatccagggggctatttcatcgtgaaaggtcaggagaaagtcattctgatc
caagagcagctgtccaagaatcgaatcattgtggagcaggacaggaagggtgcagtggga
gcctcagttaccagctccactcacgagaagaaaagcagaactaatatgatcgttaaacaa
ggcagattctacctcagacacaacacgctgtcggaggacgctcccatcgccatcatattc
aagggtatgggcgtagagagtgaccaggagatagtgcagatgatcggtacagaggagcac
gtcatggccagcttcgccccgagcctggaggagtgccagaaagcccagatcttcacacag
actcaggctctgcgctacctcgggaataaagtgcggagacagcgcatgtggggaggtccc
aagaagaccaagatggaggaggccagagagctgctggcatctcttatcctcacacacgtg
cctgtcaaagagtttaactttagggccaagtgtatttacttggctgtgatggtgaggaga
gtgatcctggcccagggggacaacaaggtggatgacagagattactatggcaacaaacgt
cttgagttggctggacagctcctgtctctgctgtttgaagatctgtttaagaagtttaac
tctgagctgaagaaaatcgccgatcagatcatccccaagcagagagctgctcagtttgat
gtggtgaagcacatgaggcaggatcagatcaccaacggcatggtcaatgccatatccaca
ggaaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggtcctgtct
cgtctctccttcatttccgctcttggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccacgttccctgcagccgtcacagtggggcatgctgtgtcca
tctgacacccccgagggagaggcctgcggtctggtgaagaacttggctctgatgacccac
atcaccaccgacatggaggacggtccaatcatcaaactggccttcaacctgggggtggaa
gacgtcaacctgctgtgtggagaggagctctcctacccgagcgtcttcctcgtcttcctc
aatggtaatatactcggtgtaattagagaccatcataagctggtcaacaccttcagactg
atgcgcagggcaggttttatcaacgagttcgtgtccatttccacaaacttgaccgaccgc
tgcgtctacatctcgtctgatggaggacgcctctgcaggccgtacatcatagtgaagaag
gggcagccgatggtgaaaaacaaacacattgaagatctgtcgcagggctacagaaccttt
gaggatttcctgcatgagggcttggtggagtacctggacgtcaacgaggagaacgactgt
cagatcgccctttatgaacacatgattaataaagacacaacacacttggagattgagccc
ttcacgctgctcggggtgtgtgccggcctcattccatacccccaccacaaccagtcaccc
aggaacacataccagtgcgctatgggcaagcaggccatgggtactatcggctacaaccag
aggaaccgtatcgacactctgatgtacctgctggcgtatcctcagaggcccatggtcaaa
acaaaaaccatcgagctgattgactttgagaagctgcctgctggtcagaacgcaaccgtg
gccgtgatgagctacagcggctacgacattgaggacgctctggtcctcaacaaagcctca
cttgacagaggatttggccgctgcctcgtctataaaaatgccaagtgtacgctgcggcgt
tacaccaaccagacctttgataaggtgatggggcccatgctggatgctgccacgcgaaag
cccatctggaggcacagcatcctggatgctgacggtatctgctcccccggtgagagagtg
gagaacaagcaggtgttggtgaacaagtccatgccaactgtcacccagacaccactggag
ggcagtacccagccaggccagccccagtacagagatgtgcccatcagctataaaggctca
acagactcgtacatcgagaaggtgatgatctcatccaacgctgaagatgctttcctcatc
aaaatcctcttgaggcagaccaggagaccagagataggagacaaattcagcagtcgtcac
ggacagaaaggtgtttgtggcctcatcgtcccacaggaggacatgccgttctgtgactcg
ggcatctgtccagatattatcatgaaccctcacggatatccctccagaatgacggtggga
aagttgattgaacttctggctgggaaggcgggagtcctagatggacggtttcactatggt
acggccttcggaggcagcaaggtgaaggatgtgtgtgaggacctcatccgttatggatac
aactaccagggcaaagactatgtcacctcaggaatcactggtgaaccactggaggcttac
atctactttggaccggtgtattatcagaaactgaagcacatggtccttgataaaatgcac
gccagagcacgaggccccagagctgttctcaccaggcagccgacagagggacgatccaga
gacggaggtctgcgtctgggcgagatggagcgcgactgtctgatcggctacggagcgagc
atgttactgctggaacgcctcatgatttccagtgacgcctttgaggtggatgtgtgcgga
cagtgcggcctgttgggatactctgggtggtgtcactactgtaagtcgtcctgccacgtt
tcctctctgcgtatcccatacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatcccccgactgaaactgtcacgttacaacgagtga
DBGET
integrated database retrieval system
