Seriola lalandi dorsalis (Yellowtail amberjack): 111660212
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Entry
111660212 CDS
T06058
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03020
RNA polymerase
slal04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111660212 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
111660212 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111660212 (polr3a)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111660212 (polr3a)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111660212 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111660212
NCBI-ProteinID:
XP_023269156
Ensembl:
ENSSLDG00000023908
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
EKLQFTDHLKRPNLAYLQKRGLKKKISDKCRKRTICLSCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDPFVSEFLQSFDIAIEHNKVVEPLLSRAQENLNPLVVLNLFKRIPQEDIHLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVAAILVGKDEKIRVSLPRPAIMKPMALWTGKQI
FSLILKPSKECPVKANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YQKCDEYIEALQTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCQDEPALSQNELVLTADAIMKRADFLC
CRDSYLEELTDTGSEKYLEEIKKFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVERTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPSPVKRPLLFDSADFHIPLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagacgtggctaagaaaataagccacatctgcttt
gggatgaaatctgctgagcagatgcgtcagcaggctcacatccaggtggtcagtaaaaat
ctgtacagtcaagacactaaacacactccactggcctatggagtgttggaccaccgtatg
ggtaccagtgagaaagaccgaccttgtctgacatgtggaaagaatctggcagattgtttg
ggacattatggctacctggatctggagctgccatgttttcatgttggctatttcaaagcc
atcataggaatcttacagatgatttgcaagacatgttccagcataatgctgacaaaagag
gagaaactgcagttcacagatcacttgaaacggcctaacctggcctatctccagaaacga
gggttgaagaagaagatctctgataaatgccgcaaaaggacaatctgtctgagctgttcc
gctttcaatggaccagtgaaaaagtgcgggctgcttaagatcatccatgagaagtataaa
acaacaaagaaggtggtggatcctttcgtgtcagagttcctgcagtcctttgatatcgcc
atcgagcacaacaaagtggtggaacctctgctgagcagagcgcaggaaaacctgaaccca
ttggttgtgctgaacctgttcaagaggattccacaggaagacattcacctgcttctgatg
aatcctgaggcagggaaacctgcggacctcatcctcacccgcctcctggtgccacctctc
tgcatacgaccctctgtggtcagcgacctgaagtcgggcaccaacgaggacgacctcact
atgaagctcacggagataatcttcctcaatgacgttatcaaaaagcatcgtatgacgggg
gctaagactcagatgatcatggaggactgggacttcctccagctgcagtgtgccctttac
atcaacagcgagctttctggaatccccctcaacatggcacctaagaaatggaccagaggt
tttgtgcagagactcaaggggaagcaaggtcgattcagaggaaacctctccgggaaaaga
gtggacttctctggcagaactgtcatttctcccgacccaaacctgaggatcgatgaggtg
gccgtcccagtacatgtggccaaaatcctgacgtacccagagagggtgaacaaggccaat
ctggagctcatgagaaaacttgttcgcaacggtcccgaagttcaccctggagccaacttc
attcagaatcgtcacacacagatgaaaaggtttttgaaatacggaaaccgcgaaaagatc
gctcaggagctgaggttcggtgatgtggttgaaaggcaccttatagacggagacatcgtc
ctcttcaatcgacaaccctctttgcacaaactcagcatcatggcccacattgccagagta
aaacctcacagaacgtttagattcaatgagtgtgtgtgcaccccctacaatgccgacttt
gacggtgacgaaatgaaccttcatctacctcagactgaagaagccaaagctgaagccctg
gtcctgatggggacaaaagctaatcttgttactccgagaaatggcgaacctctgattgct
gctattcaggactttctgacaggggcctacctcttgacgctgaaggacaccttctttgac
agatcaaaagcctgtcagatagttgccgcgatcctggtgggcaaagatgagaaaatcagg
gtctctctcccccgaccggctataatgaagcccatggctctctggacaggcaaacagatt
ttcagcctcattctgaagccaagtaaggaatgtccagtcaaggccaacctgcggaccaag
ggcaaacagtactgtggcaagggagaggatctctgtcataatgactcattcgtggtgatc
cacaacagtgagcttatgtgtggcagcatggacaagggcaccttgggatccggctccaag
aacaacatcttctacatcctgctgagagactggggacagctggaggctgccaatgccatg
tcccgcctggcaagactcgctccagtgtatctttccaaccgaggcttttctattggaatt
ggtgacgtgacaccgggccagggtctgctgaaggccaaacaggacctgctggatgatggc
taccagaagtgtgacgaatacatcgaagctttgcagacgggcaagttgcagcagcagccg
ggctgcacagcggaggagaccctggaggctctcattttgagagagctgtctgtcatcaga
gaccgagctggcagcgcctgcctcagggagctggacaagagcaacagccctctcatcatg
gctctttgtggctccaaaggatccttcattaatatctctcagatgattgcctgtgtgggc
cagcaggccataagtggctcgcgagtacctgatggttttgagaatcgttccttgcctcac
tttgaaaagcattcaaagctgcctgctgctaaaggctttgtggccgacagcttctattca
ggcctgacacccacagagttcttcttccacaccatggctgggcgggagggcctggtggac
actgctgtgaaaacagcagagactggatacatgcagaggcgactggtgaagtccttggag
gatttgtgctcgcagtacgacctgacagtacgcagctccaccggcgacatcattcagttt
atttatggcggcgacggtctggaccccgctgcaatggagggaaaggatgagccgctggag
tttaagagggtcctggacaacatccgagcagtctacacatgtcaagatgagcctgcactc
agtcaaaacgagctggtcctcactgcagatgctatcatgaagagagctgacttcttgtgc
tgcagagacagctacttggaggagttaactgacacaggctcagagaagtacctggaggag
ataaagaagtttattaagagcatctcagaaaggatcaagaaaaccagagataagtacggc
atcaacgacaacggaacaagcgagccaaaagttctctatcagctggaccgcattaccccc
acccagctagagaagttccttgaaacctgcagagacaaatacatgagagctcagatggag
ccggggtcagctgtaggggccctgtgtgcgcagagcattggagagcctggtacgcagatg
accctgaaaaccttccactttgctggcgtagcatcaatgaacatcactctgggggtgcct
cgcatcaaagagatcatcaatgcctccaagaacatcagcaccccgataattacggcccat
ttggatgtggaagacgacgctgactttgccaggctggtgaaggggaggatagagaaaact
cttcttggagagatttctgaatacattgaagaggttttcctaccggatgactgtttcatc
ctggtgaaactgtcactggagagaataagactgttgcgactggaggtaaatgcagaaact
gtgcgttactctatctgcatgtctaagctgcgagtgaaaccaggagacatcgctgtgcac
ggcgaggcagtggtgtgtgtgtctccacgagagaacaacaaaagctccatgtactatgtg
ttgcagtcattaaaagaagagcttcctaaggtggtggttcaaggaataccagaggttgcc
cgagctgtcattcacattgatgaacagagcggcaagaacaaatacaaactcctggtggag
ggggacaacctgcgagcggtcatggctacacacggagtgaacggaagcaggaccacttca
aacaacacatatgaggttgaaaggaccttgggtatcgaggctgctagatcgaccatcatc
aatgagattcagtacaccatggtcaaccacggaatgagcattgaccggcgtcatgtcatg
cttctcgcagatctcatgtcctataagggggagatactgggaatcaccaggtttggttta
gccaaaatgaaggagagtgtcctcatgctggcctccttcgagaaaacagctgatcatctt
tttgatgccgcctacttcggacaaaaggactctgtctgcggggtgtctgagtgcatcatc
atggggattccaatgaatatcggaacaggactctttaaactcctacacaaggctgacaag
gatccctctccagtcaaaaggcctctcctctttgacagcgcagacttccatatacctctg
atcacatag
DBGET
integrated database retrieval system
