Seriola lalandi dorsalis (Yellowtail amberjack): 111669476
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Entry
111669476 CDS
T06058
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111669476 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111669476 (polr1b)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111669476 (polr1b)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111669476 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
111669476
NCBI-ProteinID:
XP_023281560
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MDYSTKWSNLPKAPSLKNLTQGGFGVLKEAQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFTIKNDRISLSFVEATVYNPVVAKGNICKEMRVFPAECRGRRCSYKGKLVADISW
SINGVPKGIIKQSLGQVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMARPKWKSRGQGYTQYGISMHCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCVSEMLRIVTEESCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLLECVRLLAPVVVDSLRRFKVLREKKIPPWTEIV
LVPKTGKASLYPGLFLFTTPCRMVRPVHNLALGKEELIGTFEQLYINVGILEDEIEPGVT
THQELFPHTMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQT
PQSPLVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKT
ELVDLADKVRGEDGVVFGTKSGEVNGKLDADGLPHIGSTLQYGDPFYSYINLNTGQTFTT
YYKSQEACVVDNIKICSNDTGSGHFKRICITVRIPRNPTIGDKFASRHGQKGILSRLWPA
EDMPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSAL
EYFGEMLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARD
KVTNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSP
LLEKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFIAELAAMNIKVKLDVK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggactattcaacaaagtggagtaatttaccgaaagccccgagtctaaagaatctgaca
cagggagggtttggggtcctgaaagaggctcaacatgcggctgttcaggatttgactaaa
gcccacatcgagtcttttgaccaggccgtcactgacggactcagccgcgttgtacaggct
atccctcccctcgagttcacaataaaaaatgacaggatcagcctttccttcgtggaagcc
acagtctacaacccagtggtcgccaaagggaacatctgcaaggaaatgagggtgtttcct
gcagagtgcaggggcagaagatgctcatataaaggaaagctggtggcagacatcagctgg
tcgatcaatggagttcccaaaggcatcatcaaacagtccctgggccaggtgccaatcatg
gtcaagtccaagctgtgtaacctgcatggtatgtctcctaaggagcttgtcgaacaccat
gaggaagcagaggaaatgggaggttattttattgtgaatggaattgagaaggttatccga
atgctgatcatgccgagaaggaactatcctattgccatggcaagacctaagtggaagagc
aggggccagggatacactcagtatggtatttctatgcattgtgtaaaggaggagcacaca
gccatcaacatgaacctgcattacctggaaaatgggactgtaatgctgaacttcatctac
cagaaagagctcttcttcctcccactaggctttgctctcaaggccttggtggacttcaca
gacttccagatctaccaggaactgatcaaaggccgcgaggacaattccttctacaagagc
tgtgtatcagagatgctgcgcatcgtcacggaggagagctgcaccacccgcagcaaggtg
ctcaattacctcggcgagcgcttcagggttaaaatgaacctccctgagtggtacaccaac
gagcagtgtgccaacttcctgctggagtgcgtgaggttactagccccagtcgtggtcgac
tcactgcgacggttcaaggtgctgagagagaagaagatccctccctggactgagattgtt
ctggttcctaaaacaggcaaggccagcttgtacccaggcctgttcctcttcactacaccc
tgtcgtatggtgcggcctgtacacaatctagctcttggaaaggaagagttaattgggaca
tttgaacagctttacatcaatgtgggcatcttggaggatgagatcgagccaggagtgacc
acacaccaggagcttttccctcacaccatgctgagcgtggtggctaacttcatcccctac
tcagaccacaaccagagtcctaggaacatgtaccagtgtcagatgggtaagcaaacgatg
ggtttccccctgcactcgtttatggatcgctcagataacaagctgtaccggctccagacc
ccacagagcccactggtcaggccgtacatgtacgaccactacaacctggacaactacccc
agtggcacaaacgccatcgtggccgtcatatcctacacaggctacgacatggaagatgca
atgattgtgaacaagtcatcatgggagagaggctttgcccatggaagtatctacaagact
gagctggtggatctggcagacaaggtgaggggagaagacggcgtggtgttcgggaccaag
tcaggtgaggtgaatggaaaactggacgctgatggactacctcacattggctcaacactt
cagtatggagaccctttctatagctacatcaacctcaacactggccagaccttcaccacc
tactacaagagccaagaggcctgtgtagtcgacaacataaaaatctgcagcaatgacact
ggctcaggccattttaaacgtatctgcatcacggtacgaatacctcgcaaccccaccatt
ggtgacaagtttgccagtcggcacggtcagaagggcatcctgagccgcctgtggccggct
gaggacatgcctttcacagagagcggcatgactcccgacatcctgttcaacccccacggc
ttcccctcccgcatgaccatcgggatgctgattgagagcatggccggcaagtccggcgcg
ctgcacggcctgagccacgacgccacacccttcaccttctctgaggagaactctgcattg
gagtacttcggtgaaatgctccgggctggtggctacaactactacggcacagagcggctc
tacagtggagtgagcggtctggagctagaggccgacatcttcatcggagtcgtctactac
cagcggctgcgtcacatggtctctgacaaatttcaggtgaggaccacaggagcacgagac
aaggtgaccaatcagccagtggggggcaggaacatccaggggggcatccgttttggggag
atggagcgagacgccctgctggcgcacggctcctccttcctgcttcacgatcgactcttc
aactgctctgaccgatcggtggctcaggtgtgtattgactgtggcagcctcctctcccct
ctgttggagaaaccaccaccctactggtcggccatgcgccaccgcaagactgtgtgcacc
ctgtgcggcaagagtgactctattgactcagtgtctgttccttatgtcttccgctatttt
atagccgagctcgcagcaatgaacatcaaagtcaaattagatgtgaagtga
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