Seriola lalandi dorsalis (Yellowtail amberjack): 111669681
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Entry
111669681 CDS
T06058
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slal03016
]
111669681 (trdmt1)
Enzymes [BR:
slal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
111669681 (trdmt1)
Transfer RNA biogenesis [BR:
slal03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111669681 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
111669681
NCBI-ProteinID:
XP_023281848
Ensembl:
ENSSLDG00000009129
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MQSGKDAGGAVASVVSSDNNIHSESGIPGHVVAAIDINTTANQIYRHNFPDTPLWNKTIE
GIALDDFNKLSFDMILMSPPCQPFTRIGLQGDISDPRTKSFLYVLDLLPRFSSPQLHRLP
RFILLENVKGFESSAARELLVKTLTGCGYSFQEFMVSPTSVGIPNSRLRYFLIAKMSTSF
STQARSEVRSQARSEVRSQARSEVRSQARSEGMSQAMSQHSQSSTSDRVCIQLPDVFPHF
AEADSSEQPTVLSPTCPGSCQSEEEVREGQVLYKLETAADAQRKRSQNQDLSIRQIQDFL
EPQREGDLEQHLLPPRTLLRYALLLDIVQPTCRRSVCFTKGYGRYVEGTGSVLQGCTETQ
MESVFAGLDQVSEEEKVQQLLKLKLRYFTPREVANLMGFPQSFMFPEGVSTLQQYRTLGN
SLNVVVVSRLLQLLVS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcgggaaagatgctggtggtgcagtagctagtgttgttagctcagataacaac
attcactcagagagcggcatacctggccatgtagtggctgccatcgacataaacaccacg
gccaatcagatctacaggcacaatttccctgacacgcccctctggaacaagaccatagag
ggcatagcactggatgacttcaataaattgtcttttgacatgattttgatgagccctccc
tgccagccattcaccaggatcggacttcagggtgacatcagtgaccccagaacaaagagc
ttcctctacgtccttgaccttctgccgaggttctcatctccacagcttcacaggctgcct
cgcttcatcctgctggagaatgtgaaaggctttgagagctccgctgccagagaactgttg
gtgaagacactgacaggatgtggatacagtttccaggagttcatggtctcacccacaagt
gtcgggatcccaaactccagactgcgctatttcctcatcgctaagatgtcaacaagcttc
agtacacaggcaaggtcagaggtgaggtcacaggcaaggtcagaggtgaggtcacaggcg
aggtcagaggtgaggtcacaggcgaggtcagaggggatgtcacaggcaatgtcacagcac
tcacaatcatcaacctctgacagagtgtgtatacagcttccagatgtcttcccacacttt
gctgaggctgattcctctgagcagcccacagtgttgagtcctacctgcccaggtagctgt
cagtcagaagaggaagtgagggagggtcaggtcctgtacaaactggagacagcagctgat
gcccagaggaagaggagccagaaccaggatctgtccatcaggcagattcaggacttcctg
gagcctcagagggagggggacctggagcagcacctcctccctcccagaaccctgctgaga
tacgctctgctgctggacatcgttcagcccacctgcaggaggtccgtctgcttcaccaag
ggatatggacgctatgtggagggaactggctcagtgctgcagggctgcacagaaacacag
atggagagtgtgtttgctggtctggatcaggtctctgaagaagagaaagtgcagcagctg
ctgaagctgaaacttcgttactttactcccagagaagtggccaatctgatgggcttcccc
cagagcttcatgtttccagagggagtctccaccttgcagcagtacagaactctaggaaac
agtctgaatgttgtggtggtgtccagactgctacagctgctcgtctcgtag
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