Sugiyamaella lignohabitans: AWJ20_1258
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Entry
AWJ20_1258 CDS
T05270
Symbol
RET1
Name
(RefSeq) DNA-directed RNA polymerase III core subunit RET1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWJ20_1258 (RET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_1258 (RET1)
Enzymes [BR:
slb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWJ20_1258 (RET1)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
AWJ20_1258 (RET1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
PadR
Motif
Other DBs
NCBI-GeneID:
30033040
NCBI-ProteinID:
XP_018735457
UniProt:
A0A167DJD8
LinkDB
All DBs
Position
A:complement(3952083..3955532)
Genome browser
AA seq
1149 aa
AA seq
DB search
MNELMKPMYKGRALTDAVNTVEDKWNLLPAFLKVKGLVKQHLDSFNYFIETDLKKIVKAN
EKILSDVDPEFYLKYLDIKVGTPQRKDVHSFSNDITPHECRLRDLTYAAPIFVDVEYTRG
KKIVVHRNLEIGRMPIMLRSSKCVLTNKTEEEMAKLDECPLDPGGYFIVNGTEKVILVQE
QLSKNRIIVETDEKKGIVQASVTSSTHERKSKTYVLTKNGKIYLKHNSVSEEIPIVLVLK
AAGIVTDHEIMELVAGPDATYQESFAINFEECSKLGVQTQQQALEYLGSKVKTVRRLNAP
KLTALQEGMEALATTIIAHISVHDLDFREKALYMAIMTRRVLMAIANPKMVDDRDYVGNK
RLELAGQLMSLLFEDLFKKFNSDFKANIDKVLKKPNRTNEFDALLNITIHSSNITMGMNR
AISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKVSGPRALQPSQFG
MLCTSDTPEGEACGLVKNLALMTHITTDVEEDPIRKCCMVLGVEDISIIGGHELHSPGTY
GVYLNGTPVGITRFPSKFVKSFRQLRRTGKVSEFISVYCNHHHNAVHIATDGGRICRPLI
IVTNGQPLVKDHHLKKLLAGEMVFDDFLKEGLVEYLDCNEENDSYIALYEPDVTSETTHL
EIEVFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQLNRIDTLLYLMVYPQQ
PMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDRGFGRCQVMKKATA
VLKRYPNQTSDRLEGISAETKIGPKQKKFTVPIFQHEVLGPDGLAEVGARIETGQTYINK
SVPVNAGENLINPNGAIQNGQAGMDAYRPTPMNYKAPEPSYIDKVMLSSSESEQPLVKVL
LRQTRRPELGDKFSSRHGQKGVCGIIVQQEDMPFSDSGVCPDIIMNPHGFPSRMTVGKMI
ELVSGKAGVLDGSLQYGTCFGGSKLADMSKILVEKGYSYSGKDMLYSGITGECLQAYIFF
GPIYYQKLKHMVMDKMHARPRGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLL
LERLMISSDAFEVDVCQTCGLMGYNGWCPSCRTSETVVKLTIPYAAKLLFQELMAMNIAP
RLKLDDVFK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagctcatgaagccaatgtataaaggacgagcacttacagatgctgtcaatacg
gttgaagataagtggaatctgttgccagcatttctgaaagtcaagggattagtcaagcaa
catctggactctttcaattattttattgaaactgacctgaagaaaattgtaaaagctaat
gaaaaaatcctcagtgacgttgaccccgagttttatctaaagtatttggatattaaggtg
ggcactcctcaaagaaaagatgttcatagtttcagtaacgatatcactcctcatgaatgt
agattgagagatttgacttatgcagcgcccatttttgtcgatgttgagtatactagagga
aagaagattgttgttcaccgaaacttagagattggaagaatgcctatcatgttaagaagt
tcaaagtgtgttttaacaaataaaactgaggaagaaatggccaagttagacgaatgccca
ttagaccctggtggatattttatcgttaatggtaccgaaaaggttattcttgtgcaagaa
cagctgagtaaaaacagaattattgtcgagactgatgagaagaaaggcatcgttcaagca
agtgtaaccagttctacgcacgagagaaaatccaaaacctatgtcttaacgaaaaatgga
aagatatatcttaaacacaactctgtcagtgaagagatcccaatcgtattggtacttaaa
gcagccggtattgtgactgatcacgaaatcatggaattggtcgctggtcccgatgccact
tatcaagagtcctttgctatcaattttgaagagtgctctaaacttggtgttcaaacccag
caacaagctttggaatacctcggttcgaaagtcaagaccgtcagaagactcaatgcacct
aagctgacggcattgcaagaaggtatggaagcgttggcaactactattatcgcacatatc
tcagtccatgatctcgatttccgggaaaaggccttgtatatggctattatgacgagacgc
gtgttaatggccattgctaatccaaagatggtagatgacagagattatgtcggaaacaaa
agattggaactggctggtcagttgatgtcacttcttttcgaagatttattcaaaaagttt
aatagtgacttcaaggctaacattgacaaggttttgaaaaagcctaatcgtacaaatgag
tttgatgctcttcttaacatcaccattcatagcagtaacatcactatgggaatgaataga
gctatttctactggtaactggtctctgaagagattcaagatggaaagagctggtgtcaca
catgttttaagtagactcagttatatatcagctcttggtatgatgacacgtatttcttct
cagttcgagaagtcaagaaaagtgtcagggcctcgtgccttgcaaccttcgcaatttggc
atgttatgtacatctgataccccagaaggtgaagcatgtggtttggttaaaaatctggct
ctcatgacacatatcacaactgatgttgaagaagatccaattcgtaaatgctgtatggta
ttgggtgttgaagacatttcaattattggaggtcacgaactgcattcacctggaacatat
ggtgtttatctgaacggtactcctgtaggtattaccagatttccatctaaatttgtcaag
tctttcagacaactgagaagaacaggaaaggtatcggagtttattagtgtgtactgtaac
catcatcacaatgccgtgcatattgctactgatggtggcagaatttgtcgaccccttatc
attgttactaatggtcaaccactagtcaaagatcatcaccttaagaagctgctagctggt
gaaatggtgtttgatgatttccttaaggaaggactggtagaatacctggactgtaatgaa
gaaaacgatagttatattgcgctatatgagcctgacgttacttccgaaaccacgcatctt
gagattgaagtcttcacagtacttggtgctgttgctggtttgattccatatcctcatcat
aatcaatcgcctcgtaatacctatcaatgtgcaatgggtaaacaagctattggggctatc
gcctataatcaacttaaccgtatcgacacattattgtatcttatggtgtatccacaacag
ccaatggtaaagactaaaaccatagagttgattgactatgataagctgccagcaggacaa
aacgccactgttgcagttatgagttattctggttacgatattgaggatgctctcgttctg
aacaagtcatctatcgaccgtggttttggtcgatgtcaagtcatgaaaaaagcaactgct
gtgctcaaaagatatcccaatcaaacatcagatcgtttggaaggtatttctgctgaaaca
aaaattggtcccaaacagaagaaattcacagttccaattttccaacacgaggttcttgga
cccgacggtttggcagaagtaggtgctagaattgaaaccggtcaaacttatatcaacaaa
tcagtcccagtcaacgcaggtgaaaatctgatcaatcccaatggagcaattcaaaatgga
caagctggaatggacgcatatagaccaacgccaatgaactataaagcgccagagcccagt
tacatcgataaagtgatgctttcatcgtcagagtcggaacagcctcttgtcaaagtgttg
ctacgacaaactcgtcgtccagagttgggtgacaagttttcctctcgtcacggacaaaag
ggtgtgtgtggtattattgtccaacaagaagatatgccgtttagtgattcaggtgtttgt
cctgatatcattatgaatccacatggtttcccctctcgtatgacagtaggtaaaatgatt
gagttggtttctggaaaggccggtgtattagatgggtctttgcaatatggtacatgtttt
ggaggatccaagctagcagatatgtccaaaatcctggttgaaaaggggtacagctactcc
ggtaaagacatgctgtattcgggaatcacgggagagtgtcttcaagcgtatattttcttc
ggccctatttattatcaaaagcttaagcacatggttatggataaaatgcatgcccgtcca
agaggtcccagagctgtactgactcgtcaacctaccgaaggtagatcccgtgatggtggt
cttcgtctcggtgagatggaacgtgattgtgtaattgcatacggtgcttcgcagttgttg
ttggaacgtctcatgatttcctctgacgctttcgaggtagatgtttgtcagacctgtggt
ctgatgggttataatggatggtgtccttcctgtcgaaccagtgaaacagtcgttaaactc
acaatcccatatgcagccaaacttcttttccaagaactcatggccatgaacatcgcccct
aggctcaaacttgatgacgtttttaagtaa
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integrated database retrieval system
