KEGG   Sugiyamaella lignohabitans: AWJ20_1846
Entry
AWJ20_1846        CDS       T05270                                 
Symbol
RPO26
Name
(RefSeq) DNA-directed RNA polymerase core subunit RPB6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
slb  Sugiyamaella lignohabitans
Pathway
slb03020  RNA polymerase
slb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:slb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AWJ20_1846 (RPO26)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AWJ20_1846 (RPO26)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slb03021]
    AWJ20_1846 (RPO26)
   03400 DNA repair and recombination proteins [BR:slb03400]
    AWJ20_1846 (RPO26)
Transcription machinery [BR:slb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     AWJ20_1846 (RPO26)
  RNA polymerase III system
   RNA polymerase III
     AWJ20_1846 (RPO26)
  RNA polymerase I system
   RNA polymerase I
     AWJ20_1846 (RPO26)
DNA repair and recombination proteins [BR:slb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AWJ20_1846 (RPO26)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 30033693
NCBI-ProteinID: XP_018736027
UniProt: A0A167E1Y8
LinkDB
Position
A:complement(join(5583929..5584385,5584506..5584525))
AA seq 158 aa
MSDDEGAFNDGYENAYDEADFEEHFSDDGDFETNGAVNGNENGTAVAAQEIDADGRTVIV
SNQDQAPRKKTAKELAIPKEKRATTPYMTKYERARVLGTRALQISMNAPVLVDLEGETDP
LQIAMKELAQRKIPLVIRRYLPDGSYEDWGCDELIVDQ
NT seq 477 nt   +upstreamnt  +downstreamnt
atgtctgacgacgaaggagcttttaatgatggctatgagaacgcatatgatgaagctgat
ttcgaagaacacttttcagatgacggagactttgagactaatggggctgtaaatggtaat
gagaacggaactgcggttgctgctcaggaaattgatgctgacggaagaaccgtgatcgta
tcgaaccaagaccaagcaccgagaaagaaaaccgccaaagagctggctatccccaaagaa
aagagagctaccacgccctacatgactaaatatgaaagagctcgtgttttaggcactcgt
gctttgcaaatcagtatgaatgctccagtcttagtcgacttagaaggtgaaaccgatcct
ttacagatcgccatgaaggaacttgctcagcgtaaaatccctttagtaattagacgatac
cttcctgacggaagttatgaagattggggatgtgatgagttgattgttgaccaatag

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