Sugiyamaella lignohabitans: AWJ20_3574
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Entry
AWJ20_3574 CDS
T05270
Symbol
RPA135
Name
(RefSeq) DNA-directed RNA polymerase I core subunit RPA135
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWJ20_3574 (RPA135)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_3574 (RPA135)
Enzymes [BR:
slb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWJ20_3574 (RPA135)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
AWJ20_3574 (RPA135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
DUF6510
Motif
Other DBs
NCBI-GeneID:
30035611
NCBI-ProteinID:
XP_018738407
UniProt:
A0A161HI57
LinkDB
All DBs
Position
B:4581076..4584246
Genome browser
AA seq
1056 aa
AA seq
DB search
MTTYRGKLILKFAYSVNDGPEEFETRDAGSIPIMLRTNRCHLEGLSPAGLVAAKEESEEL
GGYFIVNGIEKLIRMLIVQRRNHPMAIVRPSFVNRGAAYTQYGIQIRCVRPDQTSQTNVL
HYLNDGNVTFRFSWRKNEYLIPVMMILKALVETNDREIFDGIVGQETGNSFLTDRLELLL
RTYKSYNLYTKQETLAYLGDKFRVVMGATADSTDIDVGKEVLRRIVLVHLTDNKDKFRQL
MFMIRKLYSLVAGECCPDNPDAAQHQEILLGGFLYGMIIKEKIDEYLQAFKAQIVSDVNR
RNAVNFTDKKYIYRVFMKMNENIGQKLQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFH
RFISHFRMVHRGSFFAELKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCFVSTE
SLNVDHIPAVLRSLGVSSPDSLSAGPTKSCVQLDGRIIGYCSHEEAKRVSDTLRFWKVEG
THNIPVQLEIGWVPPSHGGQYPGVFLFSSQARMIRPVKYLPLEKEDWVGPFEQVYMNIAV
TPEEITSNVHSHVEFSPTNIFSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGTALVHR
SDNKLYHLQTGQSPIVRAGLYDEYGMDQFPNGTNAVVAVISYTGYDMDDAMILNKSALER
GFGHGSVYKVEKVDLSMKRRRGEPITQHFGFGKDQWPEKWTEKLDDDGLPIIGVLLEEGD
PIVAYFDEILGKTKVKLYKSSEPAYVSEVKLLGDENGDQEFQSLTVKLRVNRSPNIGDKF
SSRHGQKGVCSQKWPQVDMPFSESGIQPDIIINPHAFPSRMTIGMFVESLAGKSGALHGF
AQDSTPFMFSEENTAADHFGQQLLKAGYNYHGNEPMYSGVTGEELRVDIYVGVVFYQRLR
HMVNDKFQVRSTGPVNKLTMQPVKGRKRHGGIRVGEMERDALIGHGTAFLLQDRLLNCSD
YTQTHLCKDCGSILTTQVSVPRVGSAAVVRCRRCATKVVGRLGAGDDSTSTAWEDGLGNR
FKGGNNISTVAIPFVLKYLDSELAAMGIKMRFNAGP
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgactacatatagaggtaagctgattctcaagtttgcatattcagttaatgatggccct
gaagagttcgagactagggatgccggtagtattccaatcatgctgagaacaaatagatgt
catttggagggattatcgccagcaggcttggtggctgcaaaagaagaatctgaagaactt
ggtggttacttcattgtcaatggtatcgaaaaattgattcgtatgttgattgttcaaaga
cgtaaccatcccatggctattgtcagaccttcctttgttaatagaggagctgcttatact
caatacggtattcagattcgttgtgttcgtcctgaccaaacttctcaaaccaatgttctt
cattatttgaatgatggtaatgttacattcagattctcttggagaaagaatgaatacttg
atccctgtaatgatgattctcaaggctcttgttgagaccaatgacagagagattttcgac
ggaattgttggtcaagagactggcaattcctttttgactgatcgtttggagttgctttta
agaacatacaaatcttacaatttatacactaagcaggaaaccttggcataccttggagac
aagtttagagttgtcatgggtgctaccgccgactcaactgatattgatgttggaaaggag
gtgttgagaagaattgtattggtgcatttgaccgataataaggacaaatttagacagtta
atgtttatgatcagaaagctctattcacttgtcgctggtgaatgttgtccagataatcca
gatgctgctcaacaccaagaaattttattgggaggctttttgtatggtatgatcatcaag
gagaaaattgacgaatatttacaagcattcaaagcccaaattgttagtgatgttaaccgc
cgtaacgctgtcaacttcacggataagaaatatatttatcgagtatttatgaagatgaat
gagaatattggccagaaattacaatatttcctgtctacaggtaatttggtttcccagtct
ggtttggatttgcagcaagtttcaggttataccgttgttgctgaaaagattaattttcat
cgtttcatttctcactttagaatggtgcacagaggttcgttctttgctgagctcaaaact
acaactgtgcggaagctcttacctgagagttggggattcttgtgtcctgtacacactcca
gatggttctccctgtggtttactaaaccatttggctcacaagtgttttgtttctactgag
tcgctaaacgtcgatcacattcctgctgtccttagatcactcggagtgagtagccctgat
tcattgtctgcaggtcctacaaagtcctgtgttcaattagatggtcgaattattggctac
tgtagccatgaggaggctaagcgtgtttccgatactttgagattttggaaggttgaagga
actcacaacattcctgtacaattagaaattggatgggtgcctccatctcacggtggtcaa
taccctggtgttttcttgttttcttctcaggctagaatgatccgtcctgtcaaatatttg
ccattggagaaagaggattgggttggaccatttgaacaagtttacatgaatattgctgtt
acaccggaagagatcacctcaaatgttcacagtcatgtcgagttctcgccaactaacata
ttctccattttggccaacttgactcctttctctgattttaatcaatctcctcgtaacatg
taccaatgccagatgggtaaacaaactatgggtacgccaggtaccgccttagtccacaga
tcggataacaagctctatcatctgcagacaggacaatcaccaattgttcgtgctggtttg
tatgatgaatatggcatggatcagttccctaatggaaccaatgccgtggtagcagttatt
tcgtatactggttatgatatggatgatgccatgattttaaacaagtcagcattggaacgt
ggttttggacacggttcagtttataaggttgaaaaggttgatcttagcatgaagagaaga
cgtggtgagccaattacccagcactttgggtttggcaaagatcaatggcctgagaagtgg
accgagaagcttgatgacgatgggttgcctattatcggtgttctgctagaagaaggagat
cctattgttgcatattttgacgaaattctgggtaagaccaaagtcaagctctacaaatca
tcggaacctgcatatgtgtcggaagtcaaacttcttggtgatgagaatggtgaccaagag
ttccagagtcttactgttaagctacgtgttaaccgttcccctaatattggtgataagttc
tcatctcgacacggtcaaaagggtgtctgttcccagaagtggcctcaagtggacatgcca
ttcagcgagagtggtatacaacctgatattattatcaacccacacgctttcccctcgcgt
atgacaattggtatgtttgtggagagtttagctggaaagtctggtgccttgcatggattt
gctcaagacagtactccttttatgttttcagaggaaaacacagctgccgatcatttcgga
caacagttactcaaggccggttacaattaccatggaaatgaacctatgtactccggtgtt
acaggtgaagaactccgtgtcgatatttacgttggtgtcgtcttctaccaacgattgaga
cacatggttaatgacaagttccaggtcagatcaaccggtcctgttaacaagttaacaatg
caacctgtcaagggaagaaagagacatggtggtatccgtgtgggagagatggagcgtgat
gctctcattggtcatggtactgcattcctgttacaagatcgtttactaaactgtagtgat
tacacacaaactcacttgtgtaaggactgtggttctattttgactactcaggtttctgtg
ccgagagttggttctgcggctgtggtaagatgtagacggtgtgccaccaaggttgttggc
cgtcttggtgccggtgatgattcgacgtcgactgcctgggaagatggtcttggaaataga
ttcaagggaggaaataatatttccacggtggccatcccatttgtattaaaatatcttgat
tccgagcttgcagctatgggtatcaaaatgagatttaatgctggcccataa
DBGET
integrated database retrieval system
