Sugiyamaella lignohabitans: AWJ20_5162
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Entry
AWJ20_5162 CDS
T05270
Symbol
KIN28
Name
(RefSeq) TFIIH complex serine/threonine-protein kinase subunit KIN28
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
slb
Sugiyamaella lignohabitans
Pathway
slb03022
Basal transcription factors
slb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AWJ20_5162 (KIN28)
09124 Replication and repair
03420 Nucleotide excision repair
AWJ20_5162 (KIN28)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
slb01001
]
AWJ20_5162 (KIN28)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slb03021
]
AWJ20_5162 (KIN28)
03019 Messenger RNA biogenesis [BR:
slb03019
]
AWJ20_5162 (KIN28)
03400 DNA repair and recombination proteins [BR:
slb03400
]
AWJ20_5162 (KIN28)
Enzymes [BR:
slb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
AWJ20_5162 (KIN28)
2.7.11.23 [RNA-polymerase]-subunit kinase
AWJ20_5162 (KIN28)
Protein kinases [BR:
slb01001
]
Serine/threonine kinases: CMGC group
CDK family
AWJ20_5162 (KIN28)
Transcription machinery [BR:
slb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AWJ20_5162 (KIN28)
Messenger RNA biogenesis [BR:
slb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
AWJ20_5162 (KIN28)
DNA repair and recombination proteins [BR:
slb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AWJ20_5162 (KIN28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
APH
Motif
Other DBs
NCBI-GeneID:
30037374
NCBI-ProteinID:
XP_018736678
UniProt:
A0A167EL28
LinkDB
All DBs
Position
D:1719724..1720716
Genome browser
AA seq
330 aa
AA seq
DB search
MIEKKVGEGTYAVVYVGRAKDTKRQIAIKMIKVGEFKDGLDMSAIREIKFLQELRHPNVI
ELLDVFSSETNLNIVLEFLPADLEVLIKDKTIIFSPADIKSWLLMTLRGLHHCHRNFILH
RDLKPNNLLLSPSGHLKLADFGLARALPASPRVNLTPRVVTRWYRAPELLFESRHYTTAV
DIWSVGIIFAELMLRTPYLPGASDLEQIDVTFRALGTPTEATWPGVSSLPGYKQIQNYPT
PSRQELQNRFLAASDNALDLMNDMIHFDPAKRIDTTQALLSKYFTESPPPTRPENLPKKA
KQDPDWEEQALKNEEREKLIQKTREARMRA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatagagaaaaaagtcggtgaaggtacatatgctgttgtatatgtaggaagagccaaa
gatacgaagaggcagattgccattaaaatgatcaaggtgggagaattcaaagatggattg
gatatgtcagctattcgtgaaatcaagtttctccaggaattgagacacccgaatgtcatt
gagctactagacgtgttttcatcggaaacgaatttgaatattgtgctggaatttcttcct
gctgatttggaagtgcttataaaagataaaacgattatatttagtccagcagacatcaaa
tcatggctgttgatgacacttcgaggattgcatcattgtcataggaatttcattcttcat
cgagatttgaaacctaataacttgctactatcaccaagtggtcatttaaaacttgccgat
ttcggtcttgctagagcactacctgcttctcctagggtgaacctgacgcctcgagtagtg
acgcggtggtacagagcacctgaactgcttttcgaatcccgtcactatactacagcagtt
gatatttggtcagtaggaattatatttgccgagctcatgttacgaacaccatatttacca
ggagcatcagatttggaacagatcgatgtcacattccgagcactaggaacgccaactgaa
gcgacatggcctggtgtatcgagtttaccagggtacaaacaaatacaaaactatcctaca
cccagcaggcaggagcttcaaaaccggttcttggctgctagtgataacgcactcgatctc
atgaacgatatgatccattttgatcctgccaagcggatcgatacgacacaagctctatta
tcgaaatatttcactgaatcaccacctccaacaagaccggaaaacctcccgaaaaaggct
aaacaagaccccgattgggaagaacaagcgctaaagaacgaagagagagaaaagctcatt
caaaagacgagagaagcaagaatgcgagcatag
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