Spirosoma linguale: Slin_5359
Help
Entry
Slin_5359 CDS
T01156
Name
(GenBank) MiaB-like tRNA modifying protein YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sli
Spirosoma linguale
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sli03009
]
Slin_5359
Enzymes [BR:
sli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Slin_5359
Ribosome biogenesis [BR:
sli03009
]
Prokaryotic type
ribosomal protein modification factors
Slin_5359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-GeneID:
8729124
NCBI-ProteinID:
ADB41327
UniProt:
D2QEY3
LinkDB
All DBs
Position
6519609..6520922
Genome browser
AA seq
437 aa
AA seq
DB search
MKTKGIRTNKINIVTLGCSKNLVDSEVLFTQLKGNGMNVTHESKKDDANIVVINTCGFID
NAKEESINTILRYVDAKEAGIVDKVYVTGCLSHRYKDELEVEMPTVDAWFGTNELPRMLK
TLRADYKHELVGERLLTTPAHFAYLKIAEGCDRPCSFCAIPLMRGGHVSRPIDELLTEAR
SLARRGTKELILIAQDLTYYGLDLYKKRNLADLIDQLADVEGIDWIRLQYAYPSGFPMDI
LDVMRNRPNVCNYLDMPLQTGSTELLKLMRRGITREKTESLIETIREKVPDITLRTTLIV
GHPGETEAMFQETYDFVERMRFDRLGVFTYSHEDDTHSFTMPDDIPADIKQERADELMDL
QQGISQELNQQKVGKTYKVLFDRKEGGYFIGRTEADSPEVDNEVLVPATQYVRLGDFANV
RIDRAEEFDLYGEVVSV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccaaaggaatacgtaccaataaaatcaatatcgtcacgcttggttgctcgaag
aacctggtggactcggaggtgctgtttacgcaactcaagggcaatggcatgaacgtgacg
cacgagtcgaagaaagatgatgccaacattgtcgttatcaatacgtgcggcttcatcgac
aacgccaaggaagaatccatcaacaccattctgcggtatgttgatgccaaagaagccggt
attgtagataaggtctacgtaacgggttgcctttctcaccgctataaagacgaactcgaa
gtggaaatgccgaccgtcgatgcctggtttggcaccaacgaacttccccggatgcttaaa
acgcttcgggccgattacaagcacgaactcgtgggcgagcgtctgcttacaactccggcc
catttcgcctacctcaaaatcgctgaaggttgcgaccgaccctgctcgttctgcgccatt
ccgctcatgcgtggtggtcacgtatcgcggcccatcgacgagctgttgaccgaagcccgg
tcgctggcccggcgcggcaccaaagaactaattctaattgcccaggacctgacctattac
ggtctcgacctttataaaaaacgcaaccttgccgacctcatcgaccaattggccgacgtg
gaaggcatcgactggattcgcttgcaatacgcctatccatcgggcttcccaatggatatt
ctggatgtaatgcgcaaccgccccaacgtttgcaactacctcgacatgcccctgcaaacc
ggttctaccgagttgctgaaactcatgcgccggggtattacgcgggagaaaaccgaaagt
ttgatcgaaaccatccgggaaaaagtaccggacatcaccctccgcaccaccctgatcgtg
ggccaccccggcgaaacggaagccatgttccaggaaacatacgatttcgtggagcgcatg
cgctttgaccgcctgggcgtgtttacctattcgcacgaagacgatacgcactcgttcacg
atgcccgacgatattccggccgacattaagcaggaacgcgccgacgaactgatggacttg
cagcagggcatttcgcaggagctgaaccagcagaaagtgggcaaaacctacaaagtgctg
ttcgaccgaaaagaaggtggttatttcattggccgcaccgaagccgactcgcccgaagtg
gataatgaagtgctggtacccgctacccaatacgttcgactgggcgacttcgccaacgta
cgcatcgaccgggctgaggagtttgatttgtacggcgaagttgttagtgtgtaa
DBGET
integrated database retrieval system
