Spirosoma linguale: Slin_5960
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Entry
Slin_5960 CDS
T01156
Name
(GenBank) phytoene desaturase
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
sli
Spirosoma linguale
Pathway
sli00906
Carotenoid biosynthesis
sli01100
Metabolic pathways
sli01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Slin_5960
Enzymes [BR:
sli01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
Slin_5960
1.3.99.28 phytoene desaturase (neurosporene-forming)
Slin_5960
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
Slin_5960
1.3.99.31 phytoene desaturase (lycopene-forming)
Slin_5960
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
HI0933_like
Pyr_redox_2
Pyr_redox
FAD_oxidored
FAD_binding_2
Pyr_redox_3
GIDA
FAD_binding_3
Thi4
AlaDh_PNT_C
MCRA
UDPG_MGDP_dh_N
Lycopene_cycl
3HCDH_N
MurD-like_N
GDI
IlvN
NAD_binding_7
NAD_binding_9
Glu_dehyd_C
Trp_halogenase
Motif
Other DBs
NCBI-GeneID:
8729741
NCBI-ProteinID:
ADB41922
UniProt:
D2QSZ0
LinkDB
All DBs
Position
complement(7225303..7226775)
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AA seq
490 aa
AA seq
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MPKRVLVIGAGFAGLAAATSLADKGYDVTILEKNSIPGGRARVFEAEGFTFDMGPSWYWM
PDVFDTYFARFGKRTSDYYNLVRLDPSYKVVFGPNEAVDLPAGLDNLEALFEGIEPGSGT
RLRQFLKQASYKYEVGMNKFVWKPSRSVTEFLSLKLLFDVTRLDVFQSFASHARKFFTHP
RLLEIVEFPVLFLGATPENTPAMYSLMNYAEMALGTWYPMGGMHEIVKAMVRLAEEKGVK
ILLNQTVQKIDIQKKTAQRVITTEGIFETDVVVAGADYNHVETSLIDETNRNYDDAYWKS
RVMAPSSLLFYLGVNKRLPRLLHHNLFFDEDFKVHAQEIYETPRWPSKPLFYASAPSKTD
PGIAPEGCENLFLLIPVAPDLTDDEATREHYYNLIMNRLEAYVGEDIRNHIVFKRSYAHN
DFKQDYNAFRGNAYGLANTLRQTAILKPSLKNKQVNNLFYTGQLTVPGPGVPPSLISGLV
VADEVAREFN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgagttcttgttattggggccggatttgccgggcttgctgctgcgaccagt
cttgccgataaaggttacgatgtcacaattcttgaaaaaaattccatacctggtggacgt
gcccgcgtatttgaggctgaaggattcaccttcgatatggggccgagttggtactggatg
cctgacgtttttgatacctactttgcccgttttggtaagagaacaagcgattactacaac
cttgttcggctcgacccttcctataaagtcgttttcggtcccaacgaggctgtagacctc
ccagccggactggataacttagaggccctgtttgaaggaattgagccgggtagtggtacc
aggttacggcagtttttaaagcaggcttcctacaagtacgaggttggcatgaataaattc
gtctggaaacccagtcggtcggtaaccgaattcttaagtctgaagctgttattcgatgtt
acgcgccttgatgtattccaatcatttgcgtcgcacgcccgtaagtttttcactcaccct
cgcctactggaaatcgtcgagtttccggtcctgtttctaggtgccacacccgaaaatacc
cctgccatgtatagtctgatgaactatgccgagatggccctgggtacctggtatccaatg
ggtggtatgcatgagattgtcaaagcgatggttcgtctggccgaagagaaaggagttaaa
attctattgaatcagaccgttcaaaagattgatatacagaagaaaacggcccagcgcgtt
attacgacagaaggtatttttgaaaccgatgtggtagtggccggcgccgattataaccat
gttgaaacaagcctgatcgacgaaacgaaccggaactatgatgatgcgtattggaaaagt
cgcgttatggcaccctcatcactcctgttctacctgggcgtaaataaacgtctaccccga
ctgctgcaccataatctgttctttgacgaagactttaaagtacacgctcaggaaatttat
gaaacaccacgctggccttccaagcccttgttttatgcctctgctccgtcaaaaacagac
cccggcattgcccctgaaggttgcgagaacctgtttctgctgattcccgtagccccggac
cttacagatgacgaagcaactcgcgaacattactataacttaatcatgaaccggctcgaa
gcctatgtaggtgaggatattcgcaaccatattgtctttaaacgtagttatgcccacaat
gattttaaacaggactacaatgcattccggggcaatgcatatggactggcgaacaccctg
cgtcaaacggcgattttaaagccgtccttgaagaataaacaggtcaacaacctattttat
accggtcaacttactgtacctggcccgggcgtcccgccttcgctcatatcaggactggtt
gtagccgacgaagtagccagagaattcaactaa
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