Sodalis ligni: GTU79_01235
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Entry
GTU79_01235 CDS
T08321
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
slig
Sodalis ligni
Pathway
slig00860
Porphyrin metabolism
slig01100
Metabolic pathways
slig01110
Biosynthesis of secondary metabolites
slig01120
Microbial metabolism in diverse environments
slig01240
Biosynthesis of cofactors
Module
slig_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
slig_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
GTU79_01235 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slig04147
]
GTU79_01235 (hemB)
Enzymes [BR:
slig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
GTU79_01235 (hemB)
Exosome [BR:
slig04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GTU79_01235 (hemB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
PgdA_N
Motif
Other DBs
NCBI-ProteinID:
QWA11489
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All DBs
Position
275427..276449
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AA seq
340 aa
AA seq
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MSNVYGAYPHRRLRRVRRYDFSRRLVAENQLTVNDLIYPVFVMEGHNRRQEVPSMPGVYR
MTLDLLIKEAETVAKLGVPVLSLFPVIESDYKSLMAEEAYNPDGLVPRTVRALKDAVPEL
GLLTDVALDPYTTHGQDGIIDDQGYVINEITKEILVRQALCHAEAGAEIVAPSDMMDGRI
GAIRERFEQHGLVNNQIMAYSAKYASCYYGPFRDAVGSSANLKGGDKKTYQMDPANSDEA
LQEVAQDLQEGADMVMVKPGMPYLDMIHRVKEEFGVPTFAYQVSGEYAMHMAAIQNGWLQ
EKPAIMESLLCFKRAGADGILTYFSKRVAQWLHDDHQRGY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtctatggtgcgtatccacatcgccgcttgcgcagggttcgtcgctacgac
ttcagccgccggctggtggccgaaaatcagctgacggtaaacgatctgatttacccggtg
tttgtgatggaaggccacaaccgccggcaagaggttccctccatgcccggcgtttaccgg
atgaccctggatttgctgataaaagaggcggaaacggtcgccaaattaggggtgccggtg
ctatcgctgtttccggtgatcgagtccgattataaatcccttatggcggaagaggcctac
aacccggacgggctggtgccccgcaccgtccgggcgctgaaagacgcggtaccggaattg
ggcttgctcaccgacgtggccctcgatccctataccactcacggccaggacggcatcatt
gatgaccagggttatgtcatcaatgaaatcactaaagagatcctggttcgtcaggcgctg
tgccacgccgaggcgggagctgaaatcgtcgcccccagcgatatgatggacgggcgtatc
ggcgccattcgtgaacggtttgaacagcatggcctggtgaacaaccagatcatggcctat
tcggccaagtatgcctcctgttattacggccccttccgcgacgcggtgggctcaagcgcc
aatctcaagggcggcgacaaaaagacctaccagatggatccggccaatagcgacgaagcc
ttgcaggaagtagcacaggatttacaagagggggcggacatggtgatggtgaagccgggc
atgccttatctggatatgattcaccgggtcaaggaagagttcggcgtaccaaccttcgcc
tatcaggtttcaggtgaatacgccatgcacatggcggcaatccaaaacggttggctgcag
gaaaaaccggcgataatggaatcattgctgtgctttaaacgggctggcgcggacggcatc
ctgacctatttctccaaacgcgtggcgcagtggctgcatgacgaccatcaacggggctat
taa
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