KEGG   Shewanella litorisediminis: JQC75_04890
Entry
JQC75_04890       CDS       T07182                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
slit  Shewanella litorisediminis
Pathway
slit00740  Riboflavin metabolism
slit01100  Metabolic pathways
slit01110  Biosynthesis of secondary metabolites
slit01240  Biosynthesis of cofactors
slit02024  Quorum sensing
Module
slit_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:slit00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JQC75_04890 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JQC75_04890 (ribD)
Enzymes [BR:slit01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JQC75_04890 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JQC75_04890 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QRH02761
LinkDB
Position
1109829..1110971
AA seq 380 aa
MSHSANRPFSAQDHAMMARAIMLAKRGQYTTRPNPNVGCVIVNDAGDIVGEGWHIRAGGP
HAEVHALKAAGVKARGATAYVTLEPCSHYGRTPPCARALIDNGLKRVVVAMTDPNPQVAG
KGLKLLQDAGIEVAHGLMEAEARALNPGFLSRMERARPFVTVKVGASLDGKTALSSGESK
WITGPEARRDVQRLRAKSCALITGIDTVLLDDPSLNVRHGELGSLGASLSEAELIQPIRV
VLDSQRRMSADAKLFGITGPILLVSAEPYDAHFLHSIPDFVTCLTLPGVDGRIDLAALLT
HLGENCNRVLVEAGGTLAGAFIAAGLCDELVLYQAPKLLGSHGRDMLQLPDYQTMAEVPG
LKLIDERKVGQDWRFTFTVA
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgagccactctgccaaccgcccattttcagcccaggaccatgccatgatggcccgcgcc
atcatgctggccaagcgtggccagtacaccacccgccccaatcccaatgtgggctgcgtg
atagtgaatgacgcaggcgatatcgtaggtgaaggttggcatatccgcgcaggtggcccc
cacgccgaagtgcatgccctcaaggcggcaggagtcaaggcccgcggcgccactgcctat
gtcactctcgagccctgcagccattatggccgcaccccgccctgtgccagggcactgatt
gataatggtttaaagcgcgttgtggtggccatgaccgaccccaacccacaggtggcgggc
aaggggcttaagctgctgcaggatgccggtatcgaggtggcccatggcctgatggaagcc
gaagcgcgcgcgctcaacccgggctttttgtcacgaatggagcgtgcccgcccgttcgtg
accgtcaaagtgggggcgagtctcgacggtaaaaccgcgctttccagcggtgagtccaag
tggatcacagggcccgaggcccgccgcgacgtgcaaaggctgcgcgcaaagtcctgcgcc
ctgattaccggtatcgatacggtactgctggatgaccccagtctcaatgtccgccatggt
gagcttggcagcctgggcgcaagcctctcggaggctgagcttatccagcccattcgggtg
gtgctcgacagtcagcgccgcatgagcgccgatgccaaactctttggtattaccggcccc
atactgctggtatccgctgagccatacgatgcacattttttgcattccatcccggatttt
gtcacctgtttgaccttgccgggcgttgatggccgtattgaccttgccgcgctgcttact
cacctcggtgaaaactgtaaccgggtgctggtggaagcaggcggcaccctggcgggcgcc
tttatcgccgcagggctttgtgatgagctggtgctgtatcaggcgcccaagctccttggc
agccatggccgcgatatgctgcagctgcccgattatcagaccatggccgaggtgccgggt
cttaagcttattgacgagcgcaaagtgggccaggattggcgctttaccttcaccgtggcc
tga

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