Shewanella litorisediminis: JQC75_12615
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Entry
JQC75_12615 CDS
T07182
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00730
Thiamine metabolism
slit01100
Metabolic pathways
slit01240
Biosynthesis of cofactors
slit04122
Sulfur relay system
Module
slit_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JQC75_12615 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JQC75_12615 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_12615 (thiI)
Enzymes [BR:
slit01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JQC75_12615 (thiI)
Transfer RNA biogenesis [BR:
slit03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JQC75_12615 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
MTS_N
Motif
Other DBs
NCBI-ProteinID:
QRH00719
LinkDB
All DBs
Position
complement(2883595..2885049)
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AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMIKSKPVRMRFTKMLESNIRNVLKKIDEDAKVQRQWDKIMVKVPKDKPE
LTALFAERLAHIPGIHHVLQVAEYDFETVDDIYQHALPVYRDMLKDKTFCVRVKRAGQHD
FNSIEVERYVGGGLNQFTEAKGVQLKNPDVTIQLEIDRDKLYMVSQRIEGLGGFPIAAQE
DVLSLISGGFDSGVASFQFIKKGSRTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEEVVTEILERIENGQMGVVLKRMMMRAATRVADRMGIQALVTGESLGQVSSQTL
TNLNVIDRCTDLLILRPLISMDKPDIIREARRIGTEDFAASMPEYCGVISQRPTVKAVLS
KVEAEEQKFSEDLLDRVLAKAEVIDIRDIAVTTSERVTETETVSSAAGNEVIVDIRAPEE
EESRPLEVDGVEVKVIPFFKLATAFAELDKDKTYLLYCERGVMSKLQALYLQEQGYSNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgttaagctgtatcccgaaatcatgattaagagcaaaccggtaagaatg
cgttttaccaagatgctcgagtccaacatccgtaacgtgctgaaaaaaatcgatgaggat
gccaaggtacagcgccaatgggacaagatcatggtcaaggtgcccaaagacaagcctgaa
ctcacagcgctttttgccgagcgtctggcccatatcccgggtattcatcatgtgctgcag
gtggccgagtacgactttgaaactgtggacgatatctatcagcacgcgctgcctgtgtac
cgcgatatgctcaaagacaaaaccttttgtgtgcgggtaaagcgtgccggtcagcatgac
ttcaactccatcgaggttgagcgctatgttggcggcggtttgaaccagtttaccgaagcc
aagggcgtgcagctgaagaacccggatgtgaccatccagctcgaaatcgatcgcgacaag
ctttatatggtcagccagcgtattgagggtttgggtggcttccccattgctgctcaggaa
gacgtgctgtctttgatttccggcggtttcgactcgggcgtggccagcttccagtttatt
aaaaagggttcccgtacccattattgcttcttcaacctggggggcgcccagcacgaaatc
ggcgtgaaacaagtggcctaccacctgtggaagacctacggcgagtcgcacaaggtgaag
tttgtgtctgtgcccttcgaagaagtggtaacagaaatcctcgagcgcattgaaaacggt
cagatgggtgtggtgcttaagcgcatgatgatgcgcgcagccacccgcgtggccgatcgc
atgggcattcaggctctggtcaccggtgagagcctgggtcaggtgtcgagccagaccctg
accaacctgaatgtcattgaccgctgcaccgatctcttgatcctgcgtccgctcatcagc
atggataaaccggacattattcgcgaagcccgccgtatcggtaccgaagattttgcggcc
tccatgcccgagtattgtggtgtgatttcccagcgccccacggtgaaggctgtgctgtcc
aaggtggaagccgaagagcagaagttctccgaagacttgctcgaccgggtgctggccaaa
gccgaagttatcgatatccgtgatattgccgtgactaccagtgagcgcgtgaccgaaact
gaaaccgtctccagcgcggccggaaatgaagttatcgtcgacatccgcgcgccggaagaa
gaagagtccagaccattggaagtggacggcgttgaagtgaaggtgatccccttcttcaag
ctggctaccgcctttgccgagcttgataaagataagacctacctgctttactgcgagcgt
ggcgtaatgagcaagctgcaagccctgtatctgcaggagcagggttacagcaacgtgaag
gtgtatcgtccctga
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