Shewanella litorisediminis: JQC75_12720
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Entry
JQC75_12720 CDS
T07182
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00500
Starch and sucrose metabolism
slit01100
Metabolic pathways
slit01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
JQC75_12720 (glgX)
Enzymes [BR:
slit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
JQC75_12720 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
QRH00738
LinkDB
All DBs
Position
complement(2914075..2916144)
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AA seq
689 aa
AA seq
DB search
MSDLHRRCGVWLFSEDGVSKAHFGVFSRHASAVFLCLFDEEGREFSYPMKRRGDFWSLTL
DGIGEGQTYGFRADGPWAPAAGHRFDPAKLLLDPYALAIDGLPKLAVAQAAQGSAGPQDP
HFAPSSDGEDNAALMPRCRVVDLAALPPFVHPKPGYAMEESVIYELHVKGFSMGFPGVPP
EHKGRFAALAAPEVIHYLKRLGVTAVELMPCQQFFDEPFLHAKGLSNYWGYNSIGFFAPH
NAYGDIREFRAMVDALHGAGIEVILDVVYNHSAEGNAMGPVYSFKGLDNACYYRLTDSGH
YINDTGCGNTLDLGQPRVLELVMDSLRYWAEVGGVDGFRFDLAACLGRMPHGFDIHCGFF
AALGQDPVLKALKLIAEPWDVGPGGYRLGEFPAAFAEWNDKYRDAMRRLWRGDEQILGEF
ARRFHGSADLFEPSHRGPWASLNFIASHDGFTLRDLLSYQQRHNLANGEDNRDGHQENLS
HNFGVEGEASELVAARKHKARAMLVTLFFSFGVPMLRAGDELWQTQQGNNNAYCQDNALT
WIDWESADRELIDFVAGLIRIRRQLPLLAATRYIHGNNPDDGRKGPFLAWFNESGLPMAG
TDWHRCGPLIAALGEHHPLRGSELLLILINPSQSAVDISLPRFAVWEQLHSLCGNSDLPA
RIEAGGTLTLPGVSIWIFHGHRDAESGTQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttgcaccggcgatgcggggtatggctatttagcgaagatggcgtcagcaag
gcgcacttcggggtgttcagtcgccatgccagcgcagtgttcctgtgccttttcgatgaa
gagggacgggagttttcctatcccatgaagcgacgtggtgatttttggtcactgaccctg
gatggcattggcgaggggcagacctacggcttccgcgccgatggtccctgggcccccgcg
gcaggtcacagattcgacccggctaaactgctgctggatccctacgccctggccattgat
gggttgccaaagcttgcggtcgcccaggcggcgcagggctcggccggtccacaggacccg
cattttgccccctcgtccgatggggaagacaatgccgccctgatgccgaggtgccgggtg
gtggacctggctgcattaccgccctttgtgcatcccaagcccggctatgccatggaagag
agcgtgatttacgagctccatgtgaagggcttttccatgggctttcccggtgtgccgcct
gagcacaaagggcgctttgccgcgctggctgcgcctgaagtcatccattatctcaagcgg
ctgggggtaacggcggtggagctgatgccctgccagcagttttttgatgagccttttttg
catgccaagggcctgtccaattattggggctacaacagcatcggctttttcgcgccccac
aatgcctatggcgacatccgcgagttcagggccatggtggatgccctgcatggcgccggt
atcgaggtcattctggatgtggtctacaaccacagcgccgaaggcaatgccatggggccg
gtatacagcttcaaggggctggacaacgcctgctattaccgcctcaccgacagcgggcat
tacatcaatgataccggttgtggaaacaccctggatttggggcagcccagggtgctggag
ctggtgatggactccctgaggtactgggccgaggtgggcggagtcgacggctttcgcttt
gatttggccgcctgccttggccgtatgccccatggctttgatatccactgcggttttttt
gccgcgctcgggcaagaccctgtgctcaaagcgctcaagcttattgccgagccctgggat
gtgggccccggcggttatcgtctcggtgaattccccgccgcctttgccgagtggaatgac
aagtaccgtgatgccatgcgcaggctctggcgtggcgacgagcaaattctcggtgaattt
gcccgccgttttcatggctcggcggatctctttgagccctcccaccgtggcccctgggcc
agcctgaattttattgccagccacgacggctttaccctgagggacctgctgagttaccag
cagcgccacaaccttgccaacggtgaagacaatcgggatggccatcaggaaaacctgagc
cacaacttcggcgtggaaggcgaggcgagtgagctggtggcggcccgcaagcacaaggcc
agggcgatgctcgttaccctgtttttctcctttggggtacccatgctgagggccggggat
gagctgtggcagacccagcagggcaataacaatgcctactgtcaggacaatgccctcacc
tggattgactgggaaagtgccgacagggaactcatcgactttgtggcggggcttattcgc
atccggcggcaactgccgctgcttgcggccacccgctatatccatggcaataacccggat
gatggccgcaaggggccttttctggcctggttcaacgagtccggcctgcccatggctggc
accgactggcatcgctgtggcccgcttatcgcggcgctgggcgagcatcatccgctgcgt
ggctcagaactcttactgatattgataaaccccagccagtcggcggtggacataagcctg
ccccggtttgccgtgtgggagcagttgcacagcctgtgcggaaacagcgacttgccggcg
cggattgaggcgggcggcaccctgacgctgcccggcgtcagtatctggatttttcacgga
cacagggatgccgaatccggcactcaataa
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