Spodoptera litura (tobacco cutworm): 111347892
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Entry
111347892 CDS
T08157
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111347892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111347892
Enzymes [BR:
sliu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111347892
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111347892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
SURF2
Motif
Other DBs
NCBI-GeneID:
111347892
NCBI-ProteinID:
XP_022814046
UniProt:
A0A9J7IG95
LinkDB
All DBs
Position
6:9529439..9535718
Genome browser
AA seq
1655 aa
AA seq
DB search
MALKSSYAPSTLGLTSVDPEYVQFLMFTDEDVKKLSVAKITNSQCFDAIGNPTKGGLYDS
ALGPLRDRNETCGTCNNVLLHCPGHFGYIELPLVVVNPLFIKNVYSIFRVSCLKCFKIQM
DDRLKFILKLQLELVDAGHITAALDLDNYVGDITSNKENSSDKPSKVIRKYQKLLKKRDP
ITETFQNKNVDKLRAKFINQYFRVINTAKKCAFCSSRLIKVTTSENKIMYNLSSEGTDKV
IKGIKILMPDEIKRFCTEIAQNDEEILKLCFPVLNNSKEKPVTNLFFMEVVPVLPPCVRP
CNILRGELIEHPQTNVYKAILQNAFAARAVLHVLTSSNQQKAIDCLDQVPRQAYEGVQGK
SPAEKLHMVWQELQKSINNLLNCEGQGLASQGLKQIIEKKTGLIRMHMMGKRVNFAARSV
ITPDPNVDIDEIGIPDAFAMKLTYPVPVTEWNVDELRKMVINGPKKHPGAEKIEMENGRI
ITIATDSIQKRKSLAKRLLTPEEFKASGLKIVHRHLVNGDVLILNRQPSLHKPSMMAHRA
RILKGEKTLRLHYANCKSYNADFDGDEMNAHFPQNEIARSEAYNIMSVRKQYLVPKDGTP
LSGLIQDHVISGVKMSLRGAFFSKADYQQLVFQALPNHKGPVKLLPPTILKPVVLWSGKQ
ILSTIIINTTPKGKPCITLVGKAKISSKAWQKTPPRPWKAGGTPFTNPNTMTEAEVIIRK
GELLSGVLDKTHYGATPYGLVHCMYELYGGDSSSALLSSFSKVFTFYLQWIGFTLGVKDI
LVVEEANKKRDDIICLVRNAGKAAAVKAADLPADVDDEKLKETIEVMYTKDPKFRANLDR
QYKSLLDSYTNNINTACLSEGLLEKFPYNNLQLMVQSGAKGSTVNTMQISCLLGQIELEG
KRPPLMISGRSLPSFPPHDVSPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTS
RSGYLQRCLIKHLESLAIAYDHTVRDADDSVIQFAYGEDGLDVLKCQFLRKDQFPFLDAN
ANAVVSEAVIDKLKENADLKDVNKANKSLKKWKKKYGSPFDKTRTSGFVQFSAIEKEQIE
LDDLPTDKTRDPFYWELEKKWRAMDADERQQYGRKKCPDPIPSKVSPEYKFGVINEQLDN
LVQSYLKNRHSDTYEENTAKDKFTEVMSAKYLESMAAPGEPVGLLAAQSIGEPSTQMTLN
TFHFAGRGDMNVTLGIPRLREILMTASAKLKTPNMDIPFRDDIPDLTKKAEKLRQKLNRV
TVADVLEKIDVECQIVIKPERQLKTTMRFQFLPQSQYKTQYAVKPTQIIKHMQNKFFDEM
FSTVRKQTKAVSGVVWSTKTKKKRSEGGGDDEDEENDAPEPEPAANLNDDSSDDEAPNDD
DDNTDAKIRKKRTEEQEYEDPESEEEEKSDDEVELTDEQAKEDGVDETITNDAETSKIVS
DVVSTLKEATNYSFDTKHHQWCELTVLFPISFLKVDLSQALREAAMKSVIHEVKNIKRAI
TNKEKNVLFLKTEGINILQMFKYNHLLDLNKLYSNDIHAIANTYGIEAANKVIIKEIQNV
FNVYGITVDPRHLTLVADYMTYNGIFEPMSRKGMEASSSPLQQMSFESSLIFLREAVLNS
KKDNIKSASSCLMLGQPCKNGTGVFSLQHFSKVIS
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaaatcatcatacgccccgtctactttgggcctgacatcggtagaccccgaa
tatgtgcagttcttgatgttcacggatgaagatgtaaagaaactcagcgttgcaaaaatt
actaacagtcaatgttttgatgccattggaaaccctacgaaaggaggtctgtatgactcg
gcgttgggacctctaagagataggaacgaaacttgtggaacttgtaataatgtactgtta
cattgcccggggcactttggctacatagagttgcctctagttgtagtaaatcctctattc
atcaagaatgtttactctatatttcgtgtcagttgcttaaaatgtttcaaaattcaaatg
gacgatagactgaaatttattctaaaacttcaactggaactggttgatgcgggtcatatc
acagccgctttagacttggacaactatgttggtgacataactagcaacaaagaaaactca
tctgataaaccatctaaagttatcagaaaataccaaaagctattgaagaaaagagaccct
ataacagaaacgtttcaaaataaaaatgtagacaaattaagagcaaagtttataaatcag
tactttagagttattaacacggctaagaaatgtgcattctgctcaagtagacttattaaa
gtaaccacttccgagaataaaatcatgtacaaccttagttctgaagggactgacaaagtt
attaaaggcatcaagattcttatgcctgatgagatcaaacggttttgtacagaaatagca
caaaatgatgaagaaattctcaaattatgttttccagttttaaacaactcaaaagaaaaa
cctgttactaatttattctttatggaagtggttcctgttttgcctccttgtgtcagacct
tgtaatattctcagaggagaacttattgaacatcctcaaactaatgtctacaaagccata
ttacaaaatgcttttgctgcacgggccgtgttgcatgtactcacatcatcaaatcaacag
aaagcaattgactgccttgaccaagtacctaggcaagcctatgaaggtgtacagggcaaa
tcacctgcagaaaaacttcatatggtttggcaagaattacaaaagagtatcaataacctt
ttgaactgtgaaggtcaaggcttagcaagtcagggcttgaaacaaatcattgaaaagaag
actgggttaatcagaatgcacatgatgggcaaaagagtaaactttgcagcccgatctgtc
atcaccccggaccccaatgttgatattgatgaaataggcatcccagatgcctttgctatg
aagttaacttacccagtaccagttacagaatggaatgtggatgaattaaggaaaatggtt
ataaatggacccaagaaacatcctggtgctgagaagatagaaatggagaatggaagaatc
attacaatagctacagattctatacaaaagaggaaaagtcttgcgaagaggttgcttaca
cctgaggagtttaaggcatctgggctgaagattgttcacagacatttagtgaatggtgat
gttctgattttgaaccgacaaccttctcttcataagccaagtatgatggcacatagagca
cgaattttgaaaggtgagaaaactcttagattacactacgccaattgtaagtcatacaac
gccgattttgatggtgatgaaatgaatgctcacttcccacagaatgagatcgcgaggagt
gaagcatataatatcatgtctgtacgaaaacagtatcttgtacccaaagatggaacaccc
ttaagtggtttgattcaagatcatgtcatttctggtgtaaaaatgtcactaaggggagca
ttcttctcgaaggctgactaccaacaacttgtattccaagctttgcctaatcacaaagga
ccagtcaaacttctaccacccaccattctaaaaccagttgttctgtggtccggtaagcaa
attttgtcaacaattatcattaatactacacctaaaggcaaaccttgcattactttggtt
gggaaagcaaaaattagttcaaaggcctggcaaaagacaccaccaaggccttggaaagct
ggtggtactccatttacaaatcctaacacaatgactgaagctgaagttattataaggaag
ggtgaacttctttctggagtactagataagactcattatggtgcaacaccttatggttta
gttcattgcatgtacgagctgtatggaggcgatagctcaagtgctctcttaagttctttt
tctaaagtcttcacgttttatttgcaatggattggatttactctcggcgtcaaagatatc
ttagttgtagaagaagctaataagaagcgcgatgatataatttgtttagttcgaaatgct
ggtaaagctgcagctgttaaagccgctgacttaccagccgatgttgatgatgaaaaatta
aaagaaactattgaagttatgtacacaaaggatcccaagtttagagctaatctagatcga
caatacaaaagcttgctagattcctacactaacaacattaatacagcatgtttatctgaa
gggctgctggaaaaattcccgtataacaaccttcaattgatggtacagtctggagctaag
ggatcaaccgtaaacactatgcaaatttcttgtttgcttggtcaaatcgagttggaaggg
aaaaggccgccattgatgatatctggtcgatcgctacctagctttccgcctcatgatgta
tctccgagagctggaggatttatagatggtcgattcatgacgggtatacaacctcaagag
ttcttcttccattgtatggctggtcgtgaaggtcttattgatactgcagtcaaaaccagt
cgatctggttacttacaaagatgtcttatcaaacatttggaaagcttagctattgcctat
gaccacacagtgagggatgctgatgacagtgtcattcaatttgcttacggagaagatgga
ctagatgttctcaaatgccaattccttagaaaagatcaatttcccttccttgatgccaac
gctaacgcagtagttagcgaagctgtaatcgataaacttaaagaaaatgcagacttaaaa
gacgttaataaagccaacaagtctttgaagaagtggaaaaagaaatatggcagtcctttt
gataaaacccgtacaagtggatttgtacaattctcagctattgaaaaagaacaaattgaa
cttgatgacctaccaacagataaaactagagatccattttattgggaattagaaaagaaa
tggcgtgctatggacgctgacgaaagacaacaatatggtcgtaaaaaatgtcccgaccct
attccgagtaaagtgtcgcctgaatataaatttggtgtaattaatgaacagttagataac
ctagtgcaaagctatttgaagaatcggcattccgacacatacgaagaaaacacagcaaaa
gacaaattcacggaggtaatgagcgctaaatatcttgaatcaatggctgctcctggcgag
cctgttggtttactagctgctcaatctataggtgaaccttcaactcagatgacactaaac
actttccacttcgctggtcgtggtgacatgaacgtgactttgggtatcccccgtcttaga
gaaattctgatgacagcctcagctaaactgaaaactccgaatatggatataccattcaga
gatgacatacctgatttgacgaaaaaagctgagaagttgaggcagaaattgaatagggta
acagtagctgatgtattagagaagatagacgtggaatgtcagattgtgatcaagcctgag
agacagctgaagacaactatgcgtttccaattcttgccgcaatctcaatacaagacacag
tacgccgtaaaacctacgcagataataaaacatatgcagaataaattctttgatgaaatg
ttctcgactgtaaggaaacaaacgaaggctgtgagtggcgtcgtttggtccactaaaacg
aaaaagaagcggtctgaaggtggtggtgatgatgaagatgaggagaatgacgcaccagaa
ccagaacctgctgctaacttgaacgatgacagttcagatgatgaggctcccaacgacgat
gatgataatactgatgcaaaaattcgaaagaagagaacagaagagcaagaatacgaagac
ccagaatctgaagaggaagagaagtcggatgatgaagtagaactgaccgatgagcaagct
aaagaagatggcgtagatgaaactatcactaacgatgcagaaacgagcaaaatcgtgtct
gacgtagtatcaacgttgaaagaagctacaaactattcctttgacaccaaacaccaccaa
tggtgtgaactaacagtacttttcccaatttccttcctaaaagtggatctctcacaagct
ctccgcgaagctgcgatgaaatccgtcatacacgaagtcaaaaacatcaaacgagcgatt
acaaacaaagaaaagaacgttctattcctcaaaactgaaggaatcaacatcctccaaatg
ttcaaatacaaccatttgttggatttaaacaaactttacagtaacgacattcatgctatt
gcgaacacgtatggcattgaggctgctaacaaagttattattaaagaaatacagaatgtg
ttcaatgtttacggtattactgtggatcctagacatttgacgttggtagctgattacatg
acgtacaatggcatcttcgaacctatgagccgaaagggaatggaagcatcgtcgtcgccc
ttacaacaaatgtcttttgaatcatccctgatattcttgagagaagccgttttgaactct
aagaaggacaatataaagtctgcatccagttgtctcatgttgggtcagccttgtaagaac
ggtactggcgtttttagcttacaacatttcagtaaagttataagctaa
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integrated database retrieval system
